Skip to content

Add doi argument to all papers and tiny socials update #3

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Merged
merged 1 commit into from
Oct 14, 2025
Merged

Add doi argument to all papers and tiny socials update #3

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
1 commit
Select commit
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
43 changes: 24 additions & 19 deletions _bibliography/papers.bib
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -8,7 +8,8 @@ @inproceedings{archit2024vimunet
author={Anwai Archit and Constantin Pape},
booktitle={Medical Imaging with Deep Learning},
year={2024},
url={https://openreview.net/forum?id=PYNwysgFeP}
url={https://openreview.net/forum?id=PYNwysgFeP},
doi={https://doi.org/10.48550/arXiv.2404.07705},
}

@article{archit2025segment,
Expand All @@ -26,15 +27,15 @@ @article{archit2025segment
}

@article{JeremiasPape+2025+203+213,
url = {https://doi.org/10.1515/mim-2024-0021},
title = {Stamped counting for biomedical images},
author = {Julia Jeremias and Constantin Pape},
pages = {203--213},
volume = {2},
number = {2},
journal = {Methods in Microscopy},
doi = {doi:10.1515/mim-2024-0021},
year = {2025},
url={https://doi.org/10.1515/mim-2024-0021},
title={Stamped counting for biomedical images},
author={Julia Jeremias and Constantin Pape},
pages={203--213},
volume={2},
number={2},
journal={Methods in Microscopy},
doi={doi:10.1515/mim-2024-0021},
year={2025},
}

@article{muth2025synapsenet,
Expand All @@ -55,30 +56,34 @@ @inproceedings{griebel2025segment
author={Titus Griebel and Anwai Archit and Constantin Pape},
booktitle={Medical Imaging with Deep Learning},
year={2025},
url={https://openreview.net/forum?id=EWGV97ESaP}
url={https://openreview.net/forum?id=EWGV97ESaP},
doi={https://doi.org/10.48550/arXiv.2502.00408},
}

@inproceedings{teuber2025parameter,
title={Parameter Efficient Fine-Tuning of Segment Anything Model for Biomedical Imaging},
author={Carolin Teuber and Anwai Archit and Constantin Pape},
booktitle={Medical Imaging with Deep Learning},
year={2025},
url={https://openreview.net/forum?id=TWPnpixpW2}
url={https://openreview.net/forum?id=TWPnpixpW2},
doi={https://doi.org/10.48550/arXiv.2502.00418},
}

@article{archit2025probabilisticdomainadaptationbiomedical,
@inproceedings{archit2025probabilisticdomainadaptationbiomedical,
title={Probabilistic Domain Adaptation for Biomedical Image Segmentation},
author={Anwai Archit and Constantin Pape},
year={2025},
publisher={ICCV Workshops (BioImage Computing)},
booktitle={ICCV Workshops (BioImage Computing)},
url={https://arxiv.org/abs/2303.11790},
doi={10.48550/arXiv.2303.11790},
}

@misc{archit2025medicosam,
doi = {10.48550/ARXIV.2501.11734},
url = {https://arxiv.org/abs/2501.11734},
author = {Archit, Anwai and Freckmann, Luca and Pape, Constantin},
title = {MedicoSAM: Towards foundation models for medical image segmentation},
publisher = {arXiv},
doi={10.48550/ARXIV.2501.11734},
url={https://arxiv.org/abs/2501.11734},
author={Archit, Anwai and Freckmann, Luca and Pape, Constantin},
title={MedicoSAM: Towards foundation models for medical image segmentation},
publisher={arXiv},
journal={arXiv Preprint},
year = {2025},
}
4 changes: 2 additions & 2 deletions _data/socials.yml
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -7,7 +7,7 @@
# username: AlbertEinstein # your username
# acm_id: # your dl.acm.org/profile/id
# blogger_url: # your blogger URL
# bluesky_url: # your bluesky URL
bluesky_url: https://bsky.app/profile/cppape.bsky.social # your bluesky URL
# dblp_url: # your DBLP profile url
# discord_id: # your discord id (18-digit unique numerical identifier)
email: [email protected] # your email address
Expand Down Expand Up @@ -48,7 +48,7 @@ github_username: computational-cell-analytics # your GitHub user name
# wikipedia_id: # your wikipedia id (Case sensitive)
# work_url: # work page URL
# x_username: # your X handle
# youtube_id: # your youtube channel id (youtube.com/@<youtube_id>)
youtube_id: ComputationalCellAnalytics # your youtube channel id (youtube.com/@<youtube_id>)
# zotero_username: # your zotero username
# custom_social: # can be any name here other than the ones already defined above
# logo: https://www.alberteinstein.com/wp-content/uploads/2024/03/cropped-favicon-192x192.png # can be png, svg, jpg
Expand Down