feat: Bump to latest native libs version

[tmathern]

• Update to support v0.59.1 version of native libs (will enable PDF manifest reading support) and make needed changes accordingly
• Some stream handling changes (to make sure in-memory validations pass)
• Formatting to make most code analysis tools more happy

Additional fixes/changes:

• Refactor ingredient handling from stream
• Fix some typings
• Remove tests that did the same as other tests (in threading tests)

Closes:

• PDF: type is unsupported #131
• asset could not be parsed: Bad BMFF Other UnsupportedOperation('read') #114 (verifying test is in another branch)
• V2 Claims in Python SDK #80

[tmathern]

Also reuse code from #142 already, as on macOS we're already using universal libraries.

[gpeacock]

Approved on the condition that you either remove the softwareAgent fields or replace them with structures.

[tmathern]

Approved on the condition that you either remove the softwareAgent fields or replace them with structures.

Done: I removed them. Let's keep it simple for the examples and tests.