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Merged
strasserle merged 33 commits into from
Sep 9, 2025
Merged

Topce rna fix #135

strasserle merged 33 commits into from
Sep 9, 2025

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@strasserle
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@strasserle strasserle commented Sep 5, 2025

known issues:

  • spongeffects > top ceRNA modules: Number of top rated centralities to display input not always effective (too many genes in plot and table)
  • spongeffects > top ceRNA modules > Network: selection of nodes not testes
  • include module members button not working yet

strasserle and others added 30 commits April 4, 2025 10:51
@strasserle
cleaning
6e03924
@strasserle
prettier ceRNA modules WIP
c1ebc5e
@strasserle
heatmap with subtype annotation for ceRNA modules
9de5807
@strasserle
special case for pancancer ceRNA heatmap
c9c80ea
@strasserle
improved ceRNA loading
026bec0
@strasserle
model filtering in form, applied in model performance plot
1b49e7f
@strasserle
applied model filter in enrichment plot, lollipop plot and class perf…
9e5eec1 
…ormance plot
@strasserle
clustering of correct values
51b5202
@strasserle
faster clustering
75b5bdc
@nictru
Merge pull request #131 from daisybio/dev
c304ead 
Merge latest developments
@strasserle
gsea backgrounds
770c2fe
@strasserle
fixed class performance plot
f5d1de8
@strasserle
y axis label depends on selected model
baa3c8e
@strasserle
better title
a16ce3a
@strasserle
remove logs
2ec3c9d
@strasserle
prettier tab names
0e7c4df
@strasserle
package updates
c03225d
@strasserle
uppercase, renaming, download button prediction
c98e9ac
@strasserle
heatmap as resusable component
9858afd
@strasserle
fetch gene expression in batches
e86d423
@strasserle
updated front page overview plot
06a76ca
@strasserle
divided class performance plot in train and test -> mean over 3 model…
ce3df90 
…s with diff params
@strasserle
better titles
15d4cbc
@strasserle
best model params
0feab43
@strasserle
extend prediction section
38815a8
@strasserle
heatmap as reusable component
a5c81cb
@strasserle
big merge
9b6d4ed
@strasserle
after merge adaptions and removing some logs
092a929
@strasserle
moved NetworkData interface to interfaces
3ecc9ed
@strasserle
restructured spongeffects and services. adding network filtered by sp…
91e0240 
…ongeffect scores in progress
@strasserle strasserle merged commit 10ca0bd into dev Sep 9, 2025
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3 participants

@strasserle @nictru