Perf: Accelerate cal_overlap in get_s calculation. #6460
Merged
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Linked Issue
Partially accleration for #6416 request.
What's changed?
Performance
Test is for 500 C atoms. Notice that we did not add omp parallel, since in this function the communication cost will significantly larger than calculation cost when using omp. Currently, the bottleneck is the call for std::map (NOT I/O PROCESS), this cannot be easily solved since it effect many other modules (requires refactor for core module).