@@ -79,7 +79,7 @@ <h3>Import<a class="headerlink" href="#import" title="Link to this heading">¶</
7979</ div >
8080< p > The output just describes what the software understands of the images it was
8181passed, in this case one sequence of data containing 400 images:</ p >
82- < div class ="highlight-none notranslate "> < div class ="highlight "> < pre > < span > </ span > DIALS 3.dev.1271-gd77d5dad1
82+ < div class ="highlight-none notranslate "> < div class ="highlight "> < pre > < span > </ span > DIALS 3.dev.1272-gc3eb48f2d
8383The following parameters have been modified:
8484
8585input {
@@ -128,7 +128,7 @@ <h3>Find Spots<a class="headerlink" href="#find-spots" title="Link to this headi
128128< div class ="header docutils container ">
129129< p > < strong > Show/Hide Log</ strong > </ p >
130130</ div >
131- < div class ="highlight-none notranslate "> < div class ="highlight "> < pre > < span > </ span > < span class ="linenos "> 1</ span > DIALS 3.dev.1271-gd77d5dad1
131+ < div class ="highlight-none notranslate "> < div class ="highlight "> < pre > < span > </ span > < span class ="linenos "> 1</ span > DIALS 3.dev.1272-gc3eb48f2d
132132< span class ="linenos "> 2</ span > The following parameters have been modified:
133133< span class ="linenos "> 3</ span >
134134< span class ="linenos "> 4</ span > spotfinder {
@@ -637,7 +637,7 @@ <h3>Indexing<a class="headerlink" href="#indexing" title="Link to this heading">
637637< div class ="header docutils container ">
638638< p > < strong > Show/Hide Log</ strong > </ p >
639639</ div >
640- < div class ="highlight-none notranslate "> < div class ="highlight "> < pre > < span > </ span > < span class ="linenos "> 1</ span > DIALS 3.dev.1271-gd77d5dad1
640+ < div class ="highlight-none notranslate "> < div class ="highlight "> < pre > < span > </ span > < span class ="linenos "> 1</ span > DIALS 3.dev.1272-gc3eb48f2d
641641< span class ="linenos "> 2</ span > The following parameters have been modified:
642642< span class ="linenos "> 3</ span >
643643< span class ="linenos "> 4</ span > input {
@@ -1365,7 +1365,7 @@ <h3>Bravais Lattice Refinement<a class="headerlink" href="#bravais-lattice-refin
13651365< div class ="header docutils container ">
13661366< p > < strong > Show/Hide Log</ strong > </ p >
13671367</ div >
1368- < div class ="highlight-none notranslate "> < div class ="highlight "> < pre > < span > </ span > < span class ="linenos "> 1</ span > DIALS 3.dev.1271-gd77d5dad1
1368+ < div class ="highlight-none notranslate "> < div class ="highlight "> < pre > < span > </ span > < span class ="linenos "> 1</ span > DIALS 3.dev.1272-gc3eb48f2d
13691369< span class ="linenos "> 2</ span > The following parameters have been modified:
13701370< span class ="linenos "> 3</ span >
13711371< span class ="linenos "> 4</ span > refinement {
@@ -1474,7 +1474,7 @@ <h3>Bravais Lattice Refinement<a class="headerlink" href="#bravais-lattice-refin
14741474< div class ="header docutils container ">
14751475< p > < strong > Show/Hide Log</ strong > </ p >
14761476</ div >
1477- < div class ="highlight-none notranslate "> < div class ="highlight "> < pre > < span > </ span > < span class ="linenos "> 1</ span > DIALS 3.dev.1271-gd77d5dad1
1477+ < div class ="highlight-none notranslate "> < div class ="highlight "> < pre > < span > </ span > < span class ="linenos "> 1</ span > DIALS 3.dev.1272-gc3eb48f2d
14781478< span class ="linenos "> 2</ span > The following parameters have been modified:
14791479< span class ="linenos "> 3</ span >
14801480< span class ="linenos "> 4</ span > refinement {
@@ -1599,7 +1599,7 @@ <h3>Integration<a class="headerlink" href="#integration" title="Link to this hea
15991599< div class ="header docutils container ">
16001600< p > < strong > Show/Hide Log</ strong > </ p >
16011601</ div >
1602- < div class ="highlight-none notranslate "> < div class ="highlight "> < pre > < span > </ span > < span class ="linenos "> 1</ span > DIALS 3.dev.1271-gd77d5dad1
1602+ < div class ="highlight-none notranslate "> < div class ="highlight "> < pre > < span > </ span > < span class ="linenos "> 1</ span > DIALS 3.dev.1272-gc3eb48f2d
16031603< span class ="linenos "> 2</ span > The following parameters have been modified:
16041604< span class ="linenos "> 3</ span > integration {
16051605< span class ="linenos "> 4</ span > mp {
@@ -2149,12 +2149,12 @@ <h3>Integration<a class="headerlink" href="#integration" title="Link to this hea
21492149< span class ="linenos "> 548</ span >
21502150< span class ="linenos "> 549</ span > Timing information for reference profile formation
21512151< span class ="linenos "> 550</ span > +-------------------+---------------+
2152- < span class ="linenos "> 551</ span > | Read time | 17.85 seconds |
2153- < span class ="linenos "> 552</ span > | Extract time | 0.41 seconds |
2152+ < span class ="linenos "> 551</ span > | Read time | 17.82 seconds |
2153+ < span class ="linenos "> 552</ span > | Extract time | 0.38 seconds |
21542154< span class ="linenos "> 553</ span > | Pre-process time | 0.02 seconds |
2155- < span class ="linenos "> 554</ span > | Process time | 9.28 seconds |
2155+ < span class ="linenos "> 554</ span > | Process time | 9.23 seconds |
21562156< span class ="linenos "> 555</ span > | Post-process time | 0.00 seconds |
2157- < span class ="linenos "> 556</ span > | Total time | 27.67 seconds |
2157+ < span class ="linenos "> 556</ span > | Total time | 27.59 seconds |
21582158< span class ="linenos "> 557</ span > +-------------------+---------------+
21592159< span class ="linenos "> 558</ span >
21602160< span class ="linenos "> 559</ span > ================================================================================
@@ -2685,12 +2685,12 @@ <h3>Integration<a class="headerlink" href="#integration" title="Link to this hea
26852685< span class ="linenos "> 1084</ span >
26862686< span class ="linenos "> 1085</ span > Timing information for integration
26872687< span class ="linenos "> 1086</ span > +-------------------+----------------+
2688- < span class ="linenos "> 1087</ span > | Read time | 23.70 seconds |
2689- < span class ="linenos "> 1088</ span > | Extract time | 7.81 seconds |
2690- < span class ="linenos "> 1089</ span > | Pre-process time | 0.27 seconds |
2691- < span class ="linenos "> 1090</ span > | Process time | 141.35 seconds |
2688+ < span class ="linenos "> 1087</ span > | Read time | 21.42 seconds |
2689+ < span class ="linenos "> 1088</ span > | Extract time | 6.59 seconds |
2690+ < span class ="linenos "> 1089</ span > | Pre-process time | 0.26 seconds |
2691+ < span class ="linenos "> 1090</ span > | Process time | 138.49 seconds |
26922692< span class ="linenos "> 1091</ span > | Post-process time | 0.00 seconds |
2693- < span class ="linenos "> 1092</ span > | Total time | 174.24 seconds |
2693+ < span class ="linenos "> 1092</ span > | Total time | 167.85 seconds |
26942694< span class ="linenos "> 1093</ span > +-------------------+----------------+
26952695< span class ="linenos "> 1094</ span >
26962696< span class ="linenos "> 1095</ span > Removing 22844 unintegrated reflections of 199389 total
@@ -2742,7 +2742,7 @@ <h3>Symmetry analysis<a class="headerlink" href="#symmetry-analysis" title="Link
27422742< div class ="header docutils container ">
27432743< p > < strong > Show/Hide Log</ strong > </ p >
27442744</ div >
2745- < div class ="highlight-none notranslate "> < div class ="highlight "> < pre > < span > </ span > < span class ="linenos "> 1</ span > DIALS 3.dev.1271-gd77d5dad1
2745+ < div class ="highlight-none notranslate "> < div class ="highlight "> < pre > < span > </ span > < span class ="linenos "> 1</ span > DIALS 3.dev.1272-gc3eb48f2d
27462746< span class ="linenos "> 2</ span > The following parameters have been modified:
27472747< span class ="linenos "> 3</ span >
27482748< span class ="linenos "> 4</ span > best_monoclinic_beta = False
@@ -2914,7 +2914,7 @@ <h3>Scaling and Merging<a class="headerlink" href="#scaling-and-merging" title="
29142914< div class ="header docutils container ">
29152915< p > < strong > Show/Hide Log</ strong > </ p >
29162916</ div >
2917- < div class ="highlight-none notranslate "> < div class ="highlight "> < pre > < span > </ span > < span class ="linenos "> 1</ span > DIALS 3.dev.1271-gd77d5dad1
2917+ < div class ="highlight-none notranslate "> < div class ="highlight "> < pre > < span > </ span > < span class ="linenos "> 1</ span > DIALS 3.dev.1272-gc3eb48f2d
29182918< span class ="linenos "> 2</ span > The following parameters have been modified:
29192919< span class ="linenos "> 3</ span > input {
29202920< span class ="linenos "> 4</ span > experiments = symmetrized.expt
@@ -2983,7 +2983,7 @@ <h3>Scaling and Merging<a class="headerlink" href="#scaling-and-merging" title="
29832983< span class ="linenos "> 67</ span > Components to be refined in this cycle for all datasets: scale, decay, absorption
29842984< span class ="linenos "> 68</ span > Performing a round of scaling with an LBFGS minimizer.
29852985< span class ="linenos "> 69</ span >
2986- < span class ="linenos "> 70</ span > Time taken for refinement 7.74
2986+ < span class ="linenos "> 70</ span > Time taken for refinement 7.66
29872987< span class ="linenos "> 71</ span >
29882988< span class ="linenos "> 72</ span > Refinement steps:
29892989< span class ="linenos "> 73</ span > +--------+--------+----------+
@@ -3062,7 +3062,7 @@ <h3>Scaling and Merging<a class="headerlink" href="#scaling-and-merging" title="
30623062< span class ="linenos "> 146</ span > Components to be refined in this cycle for all datasets: scale, decay, absorption
30633063< span class ="linenos "> 147</ span > Performing a round of scaling with an LBFGS minimizer.
30643064< span class ="linenos "> 148</ span >
3065- < span class ="linenos "> 149</ span > Time taken for refinement 2.83
3065+ < span class ="linenos "> 149</ span > Time taken for refinement 2.84
30663066< span class ="linenos "> 150</ span >
30673067< span class ="linenos "> 151</ span > Refinement steps:
30683068< span class ="linenos "> 152</ span > +--------+--------+----------+
@@ -3125,7 +3125,7 @@ <h3>Scaling and Merging<a class="headerlink" href="#scaling-and-merging" title="
31253125< span class ="linenos "> 209</ span > Components to be refined in this cycle for all datasets: scale, decay, absorption
31263126< span class ="linenos "> 210</ span > Performing a round of scaling with a Levenberg-Marquardt minimizer.
31273127< span class ="linenos "> 211</ span >
3128- < span class ="linenos "> 212</ span > Time taken for refinement 4.40
3128+ < span class ="linenos "> 212</ span > Time taken for refinement 4.27
31293129< span class ="linenos "> 213</ span >
31303130< span class ="linenos "> 214</ span > Refinement steps:
31313131< span class ="linenos "> 215</ span > +--------+--------+----------+
@@ -3149,7 +3149,7 @@ <h3>Scaling and Merging<a class="headerlink" href="#scaling-and-merging" title="
31493149< span class ="linenos "> 233</ span > Components to be refined in this cycle for all datasets: scale, decay, absorption
31503150< span class ="linenos "> 234</ span > Performing a round of scaling with a Levenberg-Marquardt minimizer.
31513151< span class ="linenos "> 235</ span >
3152- < span class ="linenos "> 236</ span > Time taken for refinement 0.91
3152+ < span class ="linenos "> 236</ span > Time taken for refinement 0.88
31533153< span class ="linenos "> 237</ span >
31543154< span class ="linenos "> 238</ span > Refinement steps:
31553155< span class ="linenos "> 239</ span > +--------+--------+----------+
@@ -3199,7 +3199,7 @@ <h3>Scaling and Merging<a class="headerlink" href="#scaling-and-merging" title="
31993199< span class ="linenos "> 283</ span > The reflection table variances have been adjusted to account for the
32003200< span class ="linenos "> 284</ span > uncertainty in the scaling model
32013201< span class ="linenos "> 285</ span >
3202- < span class ="linenos "> 286</ span > Total time taken: 21.1864s
3202+ < span class ="linenos "> 286</ span > Total time taken: 20.9045s
32033203< span class ="linenos "> 287</ span >
32043204< span class ="linenos "> 288</ span > ================================================================================
32053205< span class ="linenos "> 289</ span >
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