co_canal_turtles

Workflow

1. Set the species and testing in Code/config.yml
2. Run Code/prep_data_species.R to organize data, augment, set starting values
3. Run Code/run_jags.R to implement JAGS in parallel on 8 cores
4. Use Code/mcmc_check.R to visualize posteriors and check ESS and $\hat{R}$
5. The mcmc_Analysis.Rmd file can be used to create figures and tables (refine & turn into supplemental materials?)