Updated runtime to take advantage of info generated from the top-level json file#99

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schirice wants to merge 11 commits intomasterfrom

Commits on Jul 12, 2021

* Fixed an issue where the pex_log was closed but a command (to remove
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* Clean the iveia tmp directory (where we put the necessary files to run a test)
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Commits on Jul 23, 2021

* Termonate the AP thread if the "BAD TRAP" is encoutered at the
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Merge branch 'refactored' of https://github.com/draperlaboratory/hope-tools into refactored
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Commits on Jan 19, 2022

* Added sanity check to ensure that:
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