Ensure AmberTools will find the correct python library and include dir

[Crivella]

Addresses failure of building AmberTools on EESSI

• {2023.06}[2023a] acpype v2023.10.27 EESSI/software-layer#1332

AmberTools uses find_package(PythonLibs) which has been deprecated (require different hints than the one we currently set for python in CMake).

With this changes we provide the dedicated hints for it to find the correct library and include directory.

[Crivella]

Removed as this is now set by the CMake configure_step

[Crivella]

@boegelbot please test @ jsc-zen3
EB_ARGS="--installpath /tmp/$USER/ebpr-4045 AmberTools-23.6-foss-2023a.eb AmberTools-24.10-foss-2024a.eb AmberTools-25.2-foss-2025a.eb"

[boegelbot]

@Crivella: Request for testing this PR well received on jsczen3l1.int.jsc-zen3.fz-juelich.de

PR test command 'if [[ develop != 'develop' ]]; then EB_BRANCH=develop ./easybuild_develop.sh 2> /dev/null 1>&2; EB_PREFIX=/home/boegelbot/easybuild/develop source init_env_easybuild_develop.sh; fi; EB_PR=4045 EB_ARGS="--installpath /tmp/$USER/ebpr-4045 AmberTools-23.6-foss-2023a.eb AmberTools-24.10-foss-2024a.eb AmberTools-25.2-foss-2025a.eb" EB_CONTAINER= EB_REPO=easybuild-easyblocks EB_BRANCH=develop /opt/software/slurm/bin/sbatch --job-name test_PR_4045 --ntasks=8 ~/boegelbot/eb_from_pr_upload_jsc-zen3.sh' executed!

• exit code: 0
• output:

Submitted batch job 9459

Test results coming soon (I hope)...

Details

- notification for comment with ID 3777460910 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

[boegelbot]

Test report by @boegelbot

Overview of tested easyconfigs (in order)

• FAIL AmberTools-23.6-foss-2023a.eb (build issue)
  (partial log available at https://gist.github.com/boegelbot/250f72b24ec43dbd66785b641a6e4f42)
• FAIL AmberTools-24.10-foss-2024a.eb (build issue)
  (partial log available at https://gist.github.com/boegelbot/e7326dbee717587398fed87d1b87f933)
• FAIL AmberTools-25.2-foss-2025a.eb (build issue)
  (partial log available at https://gist.github.com/boegelbot/6809aa4831d6f21e760816f228207793)

Build succeeded for 0 out of 3 (total: 3 mins 53 secs) (3 easyconfigs in total)
jsczen3c2.int.jsc-zen3.fz-juelich.de - Linux Rocky Linux 9.7, x86_64, AMD EPYC-Milan Processor (zen3), Python 3.9.23
See https://gist.github.com/boegelbot/65e9bdab0620efded5273cfe489d1d30 for a full test report.

NOTES

== 2026-01-21 11:14:35,951 run.py:637 INFO Output of 'python ...' shell command (stdout + stderr):
NoInternetAccess: Cannot connect to https://ambermd.org
Preparing to apply specific updates... please wait.

🫤
Will have to retry when their servers are back online

[branfosj]

== 2026-01-21 11:14:35,951 run.py:637 INFO Output of 'python ...' shell command (stdout + stderr):
NoInternetAccess: Cannot connect to https://ambermd.org
Preparing to apply specific updates... please wait.

🫤 Will have to retry when their servers are back online

I proposed easybuilders/easybuild-easyconfigs#23747 last time that site was down and also to allow fully offline builds. See also #3900 and #3901

[Crivella]

@boegelbot please test @ jsc-zen3
EB_ARGS="--installpath /tmp/$USER/ebpr-4045 AmberTools-23.6-foss-2023a.eb AmberTools-24.10-foss-2024a.eb AmberTools-25.2-foss-2025a.eb"

[boegelbot]

@Crivella: Request for testing this PR well received on jsczen3l1.int.jsc-zen3.fz-juelich.de

PR test command 'if [[ develop != 'develop' ]]; then EB_BRANCH=develop ./easybuild_develop.sh 2> /dev/null 1>&2; EB_PREFIX=/home/boegelbot/easybuild/develop source init_env_easybuild_develop.sh; fi; EB_PR=4045 EB_ARGS="--installpath /tmp/$USER/ebpr-4045 AmberTools-23.6-foss-2023a.eb AmberTools-24.10-foss-2024a.eb AmberTools-25.2-foss-2025a.eb" EB_CONTAINER= EB_REPO=easybuild-easyblocks EB_BRANCH=develop /opt/software/slurm/bin/sbatch --job-name test_PR_4045 --ntasks=8 ~/boegelbot/eb_from_pr_upload_jsc-zen3.sh' executed!

• exit code: 0
• output:

Submitted batch job 9468

Test results coming soon (I hope)...

Details

- notification for comment with ID 3784582058 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

[boegelbot]

Test report by @boegelbot

Overview of tested easyconfigs (in order)

• SUCCESS AmberTools-23.6-foss-2023a.eb

• SUCCESS AmberTools-24.10-foss-2024a.eb

• SUCCESS AmberTools-25.2-foss-2025a.eb

Build succeeded for 3 out of 3 (total: 5 hours 20 mins 42 secs) (3 easyconfigs in total)
jsczen3c1.int.jsc-zen3.fz-juelich.de - Linux Rocky Linux 9.7, x86_64, AMD EPYC-Milan Processor (zen3), Python 3.9.23
See https://gist.github.com/boegelbot/564fc1213a3d3eec03505de2a7ac44a1 for a full test report.