Skip to content
Open
Changes from 1 commit
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
6 changes: 3 additions & 3 deletions R/cor_diff.R
Original file line number Diff line number Diff line change
Expand Up @@ -28,7 +28,7 @@
cor_diff <- function(data, x, y, x2 = NULL, y2 = NULL, method = "parametric", ...) {

# If pairs are passed
if(length(x) == 2 & length(y) == 2) {
if(length(x) == 2 && length(y) == 2) {

Check warning on line 31 in R/cor_diff.R

View workflow job for this annotation

GitHub Actions / lint / lint

file=R/cor_diff.R,line=31,col=5,[spaces_left_parentheses_linter] Place a space before left parenthesis, except in a function call.

Check warning on line 31 in R/cor_diff.R

View workflow job for this annotation

GitHub Actions / lint-changed-files / lint-changed-files

file=R/cor_diff.R,line=31,col=5,[spaces_left_parentheses_linter] Place a space before left parenthesis, except in a function call.
Copy link
Member

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

space_around

x2 <- y[1]
y2 <- y[2]
y <- x[2]
Expand All @@ -36,7 +36,7 @@
}

# Compute
if(method %in% c("bootstrapping")) {

Check warning on line 39 in R/cor_diff.R

View workflow job for this annotation

GitHub Actions / lint / lint

file=R/cor_diff.R,line=39,col=5,[spaces_left_parentheses_linter] Place a space before left parenthesis, except in a function call.

Check warning on line 39 in R/cor_diff.R

View workflow job for this annotation

GitHub Actions / lint / lint

file=R/cor_diff.R,line=39,col=18,[unnecessary_concatenation_linter] Remove unnecessary c() of a constant.

Check warning on line 39 in R/cor_diff.R

View workflow job for this annotation

GitHub Actions / lint-changed-files / lint-changed-files

file=R/cor_diff.R,line=39,col=5,[spaces_left_parentheses_linter] Place a space before left parenthesis, except in a function call.

Check warning on line 39 in R/cor_diff.R

View workflow job for this annotation

GitHub Actions / lint-changed-files / lint-changed-files

file=R/cor_diff.R,line=39,col=18,[unnecessary_concatenation_linter] Remove unnecessary c() of a constant.
out <- .cor_diff_bootstrapping(data, x, y, x2, y2, ...)
} else {
out <- .cor_diff_parametric(data, x, y, x2, y2, ...)
Expand All @@ -56,11 +56,11 @@

insight::check_if_installed("psych", "for 'parametric' correlation difference method")

args <- list(n = nrow(data), r12 = cor(data[[x]], data[[y]]))

Check warning on line 59 in R/cor_diff.R

View workflow job for this annotation

GitHub Actions / lint / lint

file=R/cor_diff.R,line=59,col=3,[object_overwrite_linter] 'args' is an exported object from package 'base'. Avoid re-using such symbols.

Check warning on line 59 in R/cor_diff.R

View workflow job for this annotation

GitHub Actions / lint-changed-files / lint-changed-files

file=R/cor_diff.R,line=59,col=3,[object_overwrite_linter] 'args' is an exported object from package 'base'. Avoid re-using such symbols.
if(x == x2 & y != y2) {
if(x == x2 && y != y2) {

Check warning on line 60 in R/cor_diff.R

View workflow job for this annotation

GitHub Actions / lint / lint

file=R/cor_diff.R,line=60,col=5,[spaces_left_parentheses_linter] Place a space before left parenthesis, except in a function call.

Check warning on line 60 in R/cor_diff.R

View workflow job for this annotation

GitHub Actions / lint-changed-files / lint-changed-files

file=R/cor_diff.R,line=60,col=5,[spaces_left_parentheses_linter] Place a space before left parenthesis, except in a function call.
args$r13 <- cor(data[[x]], data[[y2]])
args$r23 <- cor(data[[y]], data[[y2]])
} else if(y == y2 & x != x2) {
} else if(y == y2 && x != x2) {

Check warning on line 63 in R/cor_diff.R

View workflow job for this annotation

GitHub Actions / lint / lint

file=R/cor_diff.R,line=63,col=12,[spaces_left_parentheses_linter] Place a space before left parenthesis, except in a function call.

Check warning on line 63 in R/cor_diff.R

View workflow job for this annotation

GitHub Actions / lint-changed-files / lint-changed-files

file=R/cor_diff.R,line=63,col=12,[spaces_left_parentheses_linter] Place a space before left parenthesis, except in a function call.
args$r13 <- cor(data[[y]], data[[x2]])
args$r23 <- cor(data[[x]], data[[x2]])
} else {
Expand All @@ -68,10 +68,10 @@
}
test <- do.call(psych::r.test, args)

out <- data.frame(

Check warning on line 71 in R/cor_diff.R

View workflow job for this annotation

GitHub Actions / lint / lint

file=R/cor_diff.R,line=71,col=10,[strings_as_factors_linter] Supply an explicit value for stringsAsFactors for this code to work before and after R version 4.0.

Check warning on line 71 in R/cor_diff.R

View workflow job for this annotation

GitHub Actions / lint-changed-files / lint-changed-files

file=R/cor_diff.R,line=71,col=10,[strings_as_factors_linter] Supply an explicit value for stringsAsFactors for this code to work before and after R version 4.0.
Method = "parametric"
)
if("t" %in% names(test)){

Check warning on line 74 in R/cor_diff.R

View workflow job for this annotation

GitHub Actions / lint / lint

file=R/cor_diff.R,line=74,col=5,[spaces_left_parentheses_linter] Place a space before left parenthesis, except in a function call.

Check warning on line 74 in R/cor_diff.R

View workflow job for this annotation

GitHub Actions / lint / lint

file=R/cor_diff.R,line=74,col=27,[brace_linter] There should be a space before an opening curly brace.

Check warning on line 74 in R/cor_diff.R

View workflow job for this annotation

GitHub Actions / lint / lint

file=R/cor_diff.R,line=74,col=27,[paren_body_linter] Put a space between a right parenthesis and a body expression.

Check warning on line 74 in R/cor_diff.R

View workflow job for this annotation

GitHub Actions / lint-changed-files / lint-changed-files

file=R/cor_diff.R,line=74,col=5,[spaces_left_parentheses_linter] Place a space before left parenthesis, except in a function call.

Check warning on line 74 in R/cor_diff.R

View workflow job for this annotation

GitHub Actions / lint-changed-files / lint-changed-files

file=R/cor_diff.R,line=74,col=27,[brace_linter] There should be a space before an opening curly brace.

Check warning on line 74 in R/cor_diff.R

View workflow job for this annotation

GitHub Actions / lint-changed-files / lint-changed-files

file=R/cor_diff.R,line=74,col=27,[paren_body_linter] Put a space between a right parenthesis and a body expression.
out$t <- test$t
} else {
out$z <- test$z
Expand Down
Loading