Fix relative CLI paths for config and file options - #16
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Resolve config paths with Path.GetFullPath before SetBasePath, and normalize baseline, output, and coverage paths in AnalysisWorkflow.Prepare. Co-authored-by: Cursor <cursoragent@cursor.com>
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Resolve config paths with Path.GetFullPath before SetBasePath, and normalize baseline, output, and coverage paths in AnalysisWorkflow.Prepare.