Skip to content

Conversation

@tcompa
Copy link
Collaborator

@tcompa tcompa commented Dec 17, 2024

Updated dependencies:

Updating dependencies
Resolving dependencies...

Package operations: 0 installs, 3 updates, 0 removals

  - Updating six (1.16.0 -> 1.17.0)
  - Updating packaging (24.1 -> 24.2)
  - Updating zipp (3.20.2 -> 3.21.0)

Writing lock file

Outdated dependencies before PR:

alabaster                                      (!) 0.7.16             
anndata                                            0.10.9             
anyio                                          (!) 4.6.2.post1        
app-model                                      (!) 0.3.0              
astropy                                        (!) 6.0.1              
astropy-iers-data                              (!) 0.2024.11.4.0.33.34
asttokens                                      (!) 2.4.1              
attrs                                          (!) 24.2.0             
cellpose                                       (!) 2.2.3              
certifi                                        (!) 2024.8.30          
contourpy                                      (!) 1.3.0              
dask                                               2024.8.0           
debugpy                                        (!) 1.8.7              
docstring-parser                                   0.15               
executing                                      (!) 0.10.0             
fastjsonschema                                 (!) 2.20.0             
filelock                                           3.13.4             
flexparser                                     (!) 0.3.1              
fonttools                                      (!) 4.54.1             
httpcore                                       (!) 1.0.6              
httpx                                          (!) 0.27.2             
imageio                                        (!) 2.36.0             
imageio-ffmpeg                                 (!) 0.4.9              
ipython                                        (!) 8.18.1             
jedi                                           (!) 0.19.1             
json5                                          (!) 0.9.25             
jupyterlab                                     (!) 4.2.5              
jupytext                                       (!) 1.16.4             
loguru                                         (!) 0.7.2              
lxml                                               4.9.4              
magicgui                                       (!) 0.9.1              
matplotlib                                     (!) 3.9.2              
napari                                         (!) 0.5.4              
napari-assistant                               (!) 0.4.10             
napari-console                                 (!) 0.1.0              
napari-segment-blobs-and-things-with-membranes (!) 0.3.8              
napari-skimage-regionprops                     (!) 0.8.2              
nbclient                                       (!) 0.10.0             
networkx                                       (!) 3.2.1              
notebook                                       (!) 7.2.2              
numcodecs                                          0.12.1             
numpy                                              1.26.4             
nvidia-cublas-cu12                             (!) 12.4.5.8           
nvidia-cuda-cupti-cu12                         (!) 12.4.127           
nvidia-cuda-nvrtc-cu12                         (!) 12.4.127           
nvidia-cuda-runtime-cu12                       (!) 12.4.127           
nvidia-cudnn-cu12                              (!) 9.1.0.70           
nvidia-cufft-cu12                              (!) 11.2.1.3           
nvidia-curand-cu12                             (!) 10.3.5.147         
nvidia-cusolver-cu12                           (!) 11.6.1.9           
nvidia-cusparse-cu12                           (!) 12.3.1.170         
nvidia-nccl-cu12                               (!) 2.21.5             
nvidia-nvjitlink-cu12                          (!) 12.4.127           
nvidia-nvtx-cu12                               (!) 12.4.127           
packaging                                          24.1               
pint                                           (!) 0.24.3             
pooch                                          (!) 1.8.0              
prometheus-client                              (!) 0.21.0             
pydantic                                           2.8.2              
pydantic-core                                      2.20.1             
pyerfa                                         (!) 2.0.1.4            
pytest                                         (!) 7.4.4              
python-json-logger                             (!) 2.0.7              
rpds-py                                        (!) 0.20.1             
scikit-image                                   (!) 0.24.0             
scipy                                              1.13.1             
setuptools                                         75.3.0             
six                                                1.16.0             
sphinx                                         (!) 7.4.7              
stack-data                                     (!) 0.5.1              
stackview                                      (!) 0.8.2              
superqt                                        (!) 0.6.7              
sympy                                          (!) 1.13.1             
tifffile                                       (!) 2024.8.30          
tomli                                          (!) 2.0.2              
tornado                                        (!) 6.4.1              
tqdm                                           (!) 4.66.6             
typer                                          (!) 0.12.5             
types-python-dateutil                          (!) 2.9.0.20241003     
webcolors                                      (!) 24.8.0             
wrapt                                          (!) 1.16.0             
zarr                                               2.18.2             
zipp                                               3.20.2             

Outdated dependencies after PR:

alabaster                                      (!) 0.7.16     1.0.0     
anndata                                            0.10.9     0.11.1    
astropy                                        (!) 6.0.1      7.0.0     
asttokens                                      (!) 2.4.1      3.0.0     
cellpose                                       (!) 2.2.3      3.1.0     
contourpy                                      (!) 1.3.0      1.3.1     
dask                                               2024.8.0   2024.12.0 
docstring-parser                                   0.15       0.16      
executing                                      (!) 0.10.0     2.1.0     
filelock                                           3.13.4     3.16.1    
imageio-ffmpeg                                 (!) 0.4.9      0.5.1     
ipython                                        (!) 8.18.1     8.30.0    
lxml                                               4.9.4      5.3.0     
matplotlib                                     (!) 3.9.4      3.10.0    
napari-segment-blobs-and-things-with-membranes (!) 0.3.8      0.3.12    
napari-skimage-regionprops                     (!) 0.8.2      0.10.1    
networkx                                       (!) 3.2.1      3.4.2     
numcodecs                                          0.12.1     0.14.1    
numpy                                              1.26.4     2.2.0     
nvidia-cublas-cu12                             (!) 12.4.5.8   12.6.4.1  
nvidia-cuda-cupti-cu12                         (!) 12.4.127   12.6.80   
nvidia-cuda-nvrtc-cu12                         (!) 12.4.127   12.6.85   
nvidia-cuda-runtime-cu12                       (!) 12.4.127   12.6.77   
nvidia-cudnn-cu12                              (!) 9.1.0.70   9.6.0.74  
nvidia-cufft-cu12                              (!) 11.2.1.3   11.3.0.4  
nvidia-curand-cu12                             (!) 10.3.5.147 10.3.7.77 
nvidia-cusolver-cu12                           (!) 11.6.1.9   11.7.1.2  
nvidia-cusparse-cu12                           (!) 12.3.1.170 12.5.4.2  
nvidia-nccl-cu12                               (!) 2.21.5     2.23.4    
nvidia-nvjitlink-cu12                          (!) 12.4.127   12.6.85   
nvidia-nvtx-cu12                               (!) 12.4.127   12.6.77   
pooch                                          (!) 1.8.0      1.8.2     
pydantic                                           2.8.2      2.10.3    
pydantic-core                                      2.20.1     2.27.1    
pytest                                         (!) 7.4.4      8.3.4     
scikit-image                                   (!) 0.24.0     0.25.0    
scipy                                              1.13.1     1.14.1    
sphinx                                         (!) 7.4.7      8.1.3     
stack-data                                     (!) 0.5.1      0.6.3     
stackview                                      (!) 0.8.2      0.12.1    
sympy                                          (!) 1.13.1     1.13.3    
tifffile                                       (!) 2024.8.30  2024.12.12
zarr                                               2.18.2     2.18.4    

Note: there may be dependencies in the table above which were not updated as part of this PR.
The reason is they require manual updating due to the way they are pinned.

@github-actions
Copy link

Coverage report

This PR does not seem to contain any modification to coverable code.

@tcompa tcompa marked this pull request as ready for review December 17, 2024 09:38
@tcompa tcompa closed this Dec 17, 2024
@tcompa tcompa deleted the poetry-update branch December 17, 2024 09:38
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

2 participants