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@tcompa tcompa commented Jan 21, 2025

Updated dependencies:

Updating dependencies
Resolving dependencies...

Package operations: 0 installs, 3 updates, 0 removals

  - Updating importlib-metadata (8.5.0 -> 8.6.1)
  - Updating dask (2024.12.1 -> 2025.1.0)
  - Updating ngio (0.1.5 -> 0.1.6)

Writing lock file

Outdated dependencies before PR:

anndata                                            0.10.9             
astropy                                        (!) 6.1.7              
astropy-iers-data                              (!) 0.2025.1.13.0.34.51
asttokens                                      (!) 2.4.1              
cellpose                                       (!) 2.2.3              
dask                                               2024.12.1          
debugpy                                        (!) 1.8.11             
docstring-parser                                   0.15               
executing                                      (!) 0.10.0             
filelock                                           3.13.4             
imageio                                        (!) 2.36.1             
imageio-ffmpeg                                 (!) 0.4.9              
importlib-metadata                                 8.5.0              
llvmlite                                       (!) 0.44.0rc2          
lxml                                               4.9.4              
napari-segment-blobs-and-things-with-membranes (!) 0.3.8              
napari-skimage-regionprops                     (!) 0.8.2              
ngio                                               0.1.5              
numba                                          (!) 0.61.0rc2          
numcodecs                                          0.13.1             
numpy                                              2.1.0              
nvidia-cublas-cu12                             (!) 12.4.5.8           
nvidia-cuda-cupti-cu12                         (!) 12.4.127           
nvidia-cuda-nvrtc-cu12                         (!) 12.4.127           
nvidia-cuda-runtime-cu12                       (!) 12.4.127           
nvidia-cudnn-cu12                              (!) 9.1.0.70           
nvidia-cufft-cu12                              (!) 11.2.1.3           
nvidia-curand-cu12                             (!) 10.3.5.147         
nvidia-cusolver-cu12                           (!) 11.6.1.9           
nvidia-cusparse-cu12                           (!) 12.3.1.170         
nvidia-nccl-cu12                               (!) 2.21.5             
nvidia-nvjitlink-cu12                          (!) 12.4.127           
nvidia-nvtx-cu12                               (!) 12.4.127           
opencv-python-headless                         (!) 4.10.0.84          
pooch                                          (!) 1.8.0              
prompt-toolkit                                 (!) 3.0.48             
pydantic                                           2.8.2              
pydantic-core                                      2.20.1             
pyopengl                                       (!) 3.1.7              
pytest                                         (!) 7.4.4              
referencing                                    (!) 0.35.1             
stack-data                                     (!) 0.5.1              
stackview                                      (!) 0.8.2              
sympy                                          (!) 1.13.1             
zarr                                               2.18.3             

Outdated dependencies after PR:

anndata                                            0.10.9     0.11.3   
astropy                                        (!) 6.1.7      7.0.0    
asttokens                                      (!) 2.4.1      3.0.0    
cellpose                                       (!) 2.2.3      3.1.0    
docstring-parser                                   0.15       0.16     
executing                                      (!) 0.10.0     2.1.0    
filelock                                           3.13.4     3.16.1   
imageio-ffmpeg                                 (!) 0.4.9      0.6.0    
lxml                                               4.9.4      5.3.0    
napari-segment-blobs-and-things-with-membranes (!) 0.3.8      0.3.12   
napari-skimage-regionprops                     (!) 0.8.2      0.10.1   
numcodecs                                          0.13.1     0.15.0   
numpy                                              2.1.0      2.2.2    
nvidia-cublas-cu12                             (!) 12.4.5.8   12.6.4.1 
nvidia-cuda-cupti-cu12                         (!) 12.4.127   12.6.80  
nvidia-cuda-nvrtc-cu12                         (!) 12.4.127   12.6.85  
nvidia-cuda-runtime-cu12                       (!) 12.4.127   12.6.77  
nvidia-cudnn-cu12                              (!) 9.1.0.70   9.6.0.74 
nvidia-cufft-cu12                              (!) 11.2.1.3   11.3.0.4 
nvidia-curand-cu12                             (!) 10.3.5.147 10.3.7.77
nvidia-cusolver-cu12                           (!) 11.6.1.9   11.7.1.2 
nvidia-cusparse-cu12                           (!) 12.3.1.170 12.5.4.2 
nvidia-nccl-cu12                               (!) 2.21.5     2.24.3   
nvidia-nvjitlink-cu12                          (!) 12.4.127   12.6.85  
nvidia-nvtx-cu12                               (!) 12.4.127   12.6.77  
pooch                                          (!) 1.8.0      1.8.2    
pydantic                                           2.8.2      2.10.5   
pydantic-core                                      2.20.1     2.27.2   
pytest                                         (!) 7.4.4      8.3.4    
stack-data                                     (!) 0.5.1      0.6.3    
stackview                                      (!) 0.8.2      0.12.1   
sympy                                          (!) 1.13.1     1.13.3   
zarr                                               2.18.3     3.0.1    

Note: there may be dependencies in the table above which were not updated as part of this PR.
The reason is they require manual updating due to the way they are pinned.

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@tcompa tcompa marked this pull request as ready for review January 21, 2025 09:25
@tcompa tcompa merged commit 647e2da into main Jan 21, 2025
19 of 20 checks passed
@tcompa tcompa deleted the poetry-update branch January 21, 2025 09:25
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