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@tcompa tcompa commented Feb 4, 2025

Updated dependencies:

Updating dependencies
Resolving dependencies...

Package operations: 0 installs, 3 updates, 0 removals

  - Updating certifi (2024.12.14 -> 2025.1.31)
  - Updating fsspec (2024.12.0 -> 2025.2.0)
  - Updating pytz (2024.2 -> 2025.1)

Writing lock file

Outdated dependencies before PR:

anndata                                            0.10.9             
astropy                                        (!) 6.1.7              
astropy-iers-data                              (!) 0.2025.1.27.0.32.44
asttokens                                      (!) 2.4.1              
babel                                          (!) 2.16.0             
beautifulsoup4                                 (!) 4.12.3             
cellpose                                       (!) 2.2.3              
certifi                                            2024.12.14         
docstring-parser                                   0.15               
executing                                      (!) 0.10.0             
filelock                                           3.13.4             
fonttools                                      (!) 4.55.6             
fsspec                                             2024.12.0          
imageio-ffmpeg                                 (!) 0.4.9              
ipython                                        (!) 8.31.0             
jupyter-events                                 (!) 0.11.0             
jupyterlab                                     (!) 4.3.4              
lxml                                               4.9.4              
mistune                                        (!) 3.1.0              
napari-segment-blobs-and-things-with-membranes (!) 0.3.8              
napari-skimage-regionprops                     (!) 0.8.2              
nbconvert                                      (!) 7.16.5             
numcodecs                                          0.13.1             
numpy                                              2.1.0              
nvidia-cublas-cu12                             (!) 12.4.5.8           
nvidia-cuda-cupti-cu12                         (!) 12.4.127           
nvidia-cuda-nvrtc-cu12                         (!) 12.4.127           
nvidia-cuda-runtime-cu12                       (!) 12.4.127           
nvidia-cudnn-cu12                              (!) 9.1.0.70           
nvidia-cufft-cu12                              (!) 11.2.1.3           
nvidia-curand-cu12                             (!) 10.3.5.147         
nvidia-cusolver-cu12                           (!) 11.6.1.9           
nvidia-cusparse-cu12                           (!) 12.3.1.170         
nvidia-nccl-cu12                               (!) 2.21.5             
nvidia-nvjitlink-cu12                          (!) 12.4.127           
nvidia-nvtx-cu12                               (!) 12.4.127           
pooch                                          (!) 1.8.0              
psygnal                                        (!) 0.11.1             
pydantic                                           2.8.2              
pydantic-core                                      2.20.1             
pytest                                         (!) 7.4.4              
pytz                                               2024.2             
pyzmq                                          (!) 26.2.0             
stack-data                                     (!) 0.5.1              
stackview                                      (!) 0.8.2              
sympy                                          (!) 1.13.1             
torch                                          (!) 2.5.1              
triton                                         (!) 3.1.0              
zarr                                               2.18.3             

Outdated dependencies after PR:

anndata                                            0.10.9     0.11.3   
astropy                                        (!) 6.1.7      7.0.0    
asttokens                                      (!) 2.4.1      3.0.0    
cellpose                                       (!) 2.2.3      3.1.0    
docstring-parser                                   0.15       0.16     
executing                                      (!) 0.10.0     2.2.0    
filelock                                           3.13.4     3.17.0   
imageio-ffmpeg                                 (!) 0.4.9      0.6.0    
lxml                                               4.9.4      5.3.0    
napari-segment-blobs-and-things-with-membranes (!) 0.3.8      0.3.12   
napari-skimage-regionprops                     (!) 0.8.2      0.10.1   
numcodecs                                          0.13.1     0.15.0   
numpy                                              2.1.0      2.2.2    
nvidia-cublas-cu12                             (!) 12.4.5.8   12.8.3.14
nvidia-cuda-cupti-cu12                         (!) 12.4.127   12.8.57  
nvidia-cuda-nvrtc-cu12                         (!) 12.4.127   12.8.61  
nvidia-cuda-runtime-cu12                       (!) 12.4.127   12.8.57  
nvidia-cudnn-cu12                              (!) 9.1.0.70   9.7.0.66 
nvidia-cufft-cu12                              (!) 11.2.1.3   11.3.3.41
nvidia-curand-cu12                             (!) 10.3.5.147 10.3.9.55
nvidia-cusolver-cu12                           (!) 11.6.1.9   11.7.2.55
nvidia-cusparse-cu12                           (!) 12.3.1.170 12.5.7.53
nvidia-cusparselt-cu12                         (!) 0.6.2      0.7.0    
nvidia-nccl-cu12                               (!) 2.21.5     2.25.1   
nvidia-nvjitlink-cu12                          (!) 12.4.127   12.8.61  
nvidia-nvtx-cu12                               (!) 12.4.127   12.8.55  
pooch                                          (!) 1.8.0      1.8.2    
pydantic                                           2.8.2      2.10.6   
pydantic-core                                      2.20.1     2.28.0   
pytest                                         (!) 7.4.4      8.3.4    
stack-data                                     (!) 0.5.1      0.6.3    
stackview                                      (!) 0.8.2      0.12.1   
sympy                                          (!) 1.13.1     1.13.3   
zarr                                               2.18.3     3.0.2    

Note: there may be dependencies in the table above which were not updated as part of this PR.
The reason is they require manual updating due to the way they are pinned.

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github-actions bot commented Feb 4, 2025

Coverage report

This PR does not seem to contain any modification to coverable code.

@tcompa tcompa marked this pull request as ready for review February 4, 2025 09:39
@tcompa tcompa merged commit ed5ffc5 into main Feb 4, 2025
20 checks passed
@tcompa tcompa deleted the poetry-update branch February 4, 2025 09:39
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2 participants