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@tcompa tcompa commented Apr 22, 2025

Updated dependencies:

Updating dependencies
Resolving dependencies...

Package operations: 0 installs, 7 updates, 0 removals

  - Updating typing-extensions (4.13.0 -> 4.13.2)
  - Updating urllib3 (2.3.0 -> 2.4.0)
  - Updating packaging (24.2 -> 25.0)
  - Updating frozenlist (1.5.0 -> 1.6.0)
  - Updating multidict (6.3.0 -> 6.4.3)
  - Updating yarl (1.18.3 -> 1.20.0)
  - Updating aiohttp (3.11.15 -> 3.11.18)

Writing lock file

Outdated dependencies before PR:

aiohttp                                            3.11.15            
anndata                                            0.10.9             
astropy                                        (!) 6.1.7              
astropy-iers-data                              (!) 0.2025.3.31.0.36.18
asttokens                                      (!) 2.4.1              
beautifulsoup4                                 (!) 4.13.3             
cellpose                                       (!) 2.2.3              
contourpy                                      (!) 1.3.1              
debugpy                                        (!) 1.8.13             
docstring-parser                                   0.15               
executing                                      (!) 0.10.0             
fastremap                                      (!) 1.15.1             
filelock                                           3.13.4             
fonttools                                      (!) 4.56.0             
frozenlist                                         1.5.0              
httpcore                                       (!) 1.0.7              
imageio-ffmpeg                                 (!) 0.4.9              
ipython                                        (!) 8.34.0             
ipywidgets                                     (!) 8.1.5              
json5                                          (!) 0.10.0             
jupyterlab                                     (!) 4.3.6              
jupyterlab-widgets                             (!) 3.0.13             
jupytext                                       (!) 1.16.7             
lxml                                               4.9.4              
multidict                                          6.3.0              
napari-assistant                               (!) 0.4.11             
napari-segment-blobs-and-things-with-membranes (!) 0.3.8              
napari-skimage-regionprops                     (!) 0.8.2              
ngio                                               0.1.6              
notebook                                       (!) 7.3.3              
numba                                          (!) 0.61.0             
numcodecs                                          0.13.1             
numpy                                              2.1.0              
nvidia-cublas-cu12                             (!) 12.4.5.8           
nvidia-cuda-cupti-cu12                         (!) 12.4.127           
nvidia-cuda-nvrtc-cu12                         (!) 12.4.127           
nvidia-cuda-runtime-cu12                       (!) 12.4.127           
nvidia-cudnn-cu12                              (!) 9.1.0.70           
nvidia-cufft-cu12                              (!) 11.2.1.3           
nvidia-curand-cu12                             (!) 10.3.5.147         
nvidia-cusolver-cu12                           (!) 11.6.1.9           
nvidia-cusparse-cu12                           (!) 12.3.1.170         
nvidia-cusparselt-cu12                         (!) 0.6.2              
nvidia-nccl-cu12                               (!) 2.21.5             
nvidia-nvjitlink-cu12                          (!) 12.4.127           
nvidia-nvtx-cu12                               (!) 12.4.127           
packaging                                          24.2               
pillow                                         (!) 11.1.0             
pooch                                          (!) 1.8.0              
prompt-toolkit                                 (!) 3.0.50             
pydantic                                           2.8.2              
pydantic-core                                      2.20.1             
pytest                                         (!) 7.4.4              
pyzmq                                          (!) 26.3.0             
setuptools                                         78.1.0             
soupsieve                                      (!) 2.6                
sphinx                                         (!) 8.1.3              
stack-data                                     (!) 0.5.1              
stackview                                      (!) 0.8.2              
sympy                                          (!) 1.13.1             
triton                                         (!) 3.2.0              
typing-extensions                                  4.13.0             
urllib3                                            2.3.0              
widgetsnbextension                             (!) 4.0.13             
yarl                                               1.18.3             
zarr                                               2.18.3             

Outdated dependencies after PR:

anndata                                            0.10.9     0.11.4      
astropy                                        (!) 6.1.7      7.0.1       
asttokens                                      (!) 2.4.1      3.0.0       
cellpose                                       (!) 2.2.3      3.1.1.1     
docstring-parser                                   0.15       0.16        
executing                                      (!) 0.10.0     2.2.0       
filelock                                           3.13.4     3.18.0      
imageio-ffmpeg                                 (!) 0.4.9      0.6.0       
ipython                                        (!) 8.35.0     9.1.0       
lxml                                               4.9.4      5.3.2       
napari-segment-blobs-and-things-with-membranes (!) 0.3.8      0.3.12      
napari-skimage-regionprops                     (!) 0.8.2      0.10.1      
ngio                                               0.1.6      0.2.2       
numcodecs                                          0.13.1     0.16.0      
numpy                                              2.1.0      2.2.5       
nvidia-cublas-cu12                             (!) 12.4.5.8   12.8.4.1    
nvidia-cuda-cupti-cu12                         (!) 12.4.127   12.8.90     
nvidia-cuda-nvrtc-cu12                         (!) 12.4.127   12.8.93     
nvidia-cuda-runtime-cu12                       (!) 12.4.127   12.8.90     
nvidia-cudnn-cu12                              (!) 9.1.0.70   9.8.0.87    
nvidia-cufft-cu12                              (!) 11.2.1.3   11.3.3.83   
nvidia-curand-cu12                             (!) 10.3.5.147 10.3.9.90   
nvidia-cusolver-cu12                           (!) 11.6.1.9   11.7.3.90   
nvidia-cusparse-cu12                           (!) 12.3.1.170 12.5.8.93   
nvidia-cusparselt-cu12                         (!) 0.6.2      0.7.1       
nvidia-nccl-cu12                               (!) 2.21.5     2.26.2.post1
nvidia-nvjitlink-cu12                          (!) 12.4.127   12.8.93     
nvidia-nvtx-cu12                               (!) 12.4.127   12.8.90     
pooch                                          (!) 1.8.0      1.8.2       
pydantic                                           2.8.2      2.11.3      
pydantic-core                                      2.20.1     2.34.1      
pytest                                         (!) 7.4.4      8.3.5       
sphinx                                         (!) 8.1.3      8.2.3       
stack-data                                     (!) 0.5.1      0.6.3       
stackview                                      (!) 0.8.2      0.15.2      
sympy                                          (!) 1.13.1     1.13.3      
triton                                         (!) 3.2.0      3.3.0       
zarr                                               2.18.3     3.0.7       

Note: there may be dependencies in the table above which were not updated as part of this PR.
The reason is they require manual updating due to the way they are pinned.

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Coverage report

This PR does not seem to contain any modification to coverable code.

@tcompa tcompa closed this Apr 23, 2025
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