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@tcompa tcompa commented Jun 17, 2025

Updated dependencies:

Updating dependencies
Resolving dependencies...

Package operations: 0 installs, 5 updates, 0 removals

  - Updating certifi (2025.4.26 -> 2025.6.15)
  - Updating msgpack (1.1.0 -> 1.1.1)
  - Updating aiohttp (3.12.12 -> 3.12.13)
  - Updating xarray (2025.4.0 -> 2025.6.1)
  - Updating ngio (0.2.9 -> 0.2.10)

Writing lock file

Outdated dependencies before PR:

aiohttp                                            3.12.12           
anndata                                            0.10.9            
astropy-iers-data                              (!) 0.2025.6.9.14.9.37
asttokens                                      (!) 2.4.1             
cellpose                                       (!) 2.2.3             
certifi                                            2025.4.26         
eval-type-backport                                 0.1.3             
executing                                      (!) 0.10.0            
filelock                                           3.13.4            
fonttools                                      (!) 4.58.2            
imageio-ffmpeg                                 (!) 0.4.9             
lxml                                               4.9.4             
msgpack                                            1.1.0             
napari-segment-blobs-and-things-with-membranes (!) 0.3.8             
napari-skimage-regionprops                     (!) 0.8.2             
ngio                                               0.2.9             
numcodecs                                          0.15.1            
numpy                                              2.1.0             
nvidia-cublas-cu12                             (!) 12.6.4.1          
nvidia-cuda-cupti-cu12                         (!) 12.6.80           
nvidia-cuda-nvrtc-cu12                         (!) 12.6.77           
nvidia-cuda-runtime-cu12                       (!) 12.6.77           
nvidia-cudnn-cu12                              (!) 9.5.1.17          
nvidia-cufft-cu12                              (!) 11.3.0.4          
nvidia-cufile-cu12                             (!) 1.11.1.6          
nvidia-curand-cu12                             (!) 10.3.7.77         
nvidia-cusolver-cu12                           (!) 11.7.1.2          
nvidia-cusparse-cu12                           (!) 12.5.4.2          
nvidia-cusparselt-cu12                         (!) 0.6.3             
nvidia-nccl-cu12                               (!) 2.26.2            
nvidia-nvjitlink-cu12                          (!) 12.6.85           
nvidia-nvtx-cu12                               (!) 12.6.77           
pooch                                              1.8.0             
pydantic                                           2.8.2             
pydantic-core                                      2.20.1            
pytest                                         (!) 7.4.4             
pyzmq                                          (!) 26.4.0            
stack-data                                     (!) 0.5.1             
stackview                                      (!) 0.8.2             
superqt                                        (!) 0.7.3             
tifffile                                       (!) 2025.6.1          
xarray                                             2025.4.0          
zarr                                               2.18.7            

Outdated dependencies after PR:

anndata                                            0.10.9    0.11.4    
asttokens                                      (!) 2.4.1     3.0.0     
cellpose                                       (!) 2.2.3     4.0.4     
eval-type-backport                                 0.1.3     0.2.2     
executing                                      (!) 0.10.0    2.2.0     
filelock                                           3.13.4    3.18.0    
imageio-ffmpeg                                 (!) 0.4.9     0.6.0     
lxml                                               4.9.4     5.4.0     
napari-segment-blobs-and-things-with-membranes (!) 0.3.8     0.3.12    
napari-skimage-regionprops                     (!) 0.8.2     0.10.1    
ngio                                               0.2.10    0.3.2     
numcodecs                                          0.15.1    0.16.1    
numpy                                              2.1.0     2.3.0     
nvidia-cublas-cu12                             (!) 12.6.4.1  12.9.1.4  
nvidia-cuda-cupti-cu12                         (!) 12.6.80   12.9.79   
nvidia-cuda-nvrtc-cu12                         (!) 12.6.77   12.9.86   
nvidia-cuda-runtime-cu12                       (!) 12.6.77   12.9.79   
nvidia-cudnn-cu12                              (!) 9.5.1.17  9.10.2.21 
nvidia-cufft-cu12                              (!) 11.3.0.4  11.4.1.4  
nvidia-cufile-cu12                             (!) 1.11.1.6  1.14.1.1  
nvidia-curand-cu12                             (!) 10.3.7.77 10.3.10.19
nvidia-cusolver-cu12                           (!) 11.7.1.2  11.7.5.82 
nvidia-cusparse-cu12                           (!) 12.5.4.2  12.5.10.65
nvidia-cusparselt-cu12                         (!) 0.6.3     0.7.1     
nvidia-nccl-cu12                               (!) 2.26.2    2.27.3    
nvidia-nvjitlink-cu12                          (!) 12.6.85   12.9.86   
nvidia-nvtx-cu12                               (!) 12.6.77   12.9.79   
pooch                                              1.8.0     1.8.2     
pydantic                                           2.8.2     2.11.7    
pydantic-core                                      2.20.1    2.35.1    
pytest                                         (!) 7.4.4     8.4.0     
stack-data                                     (!) 0.5.1     0.6.3     
stackview                                      (!) 0.8.2     0.18.0    
zarr                                               2.18.7    3.0.8     

Note: there may be dependencies in the table above which were not updated as part of this PR.
The reason is they require manual updating due to the way they are pinned.

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This PR does not seem to contain any modification to coverable code.

@tcompa tcompa closed this Jun 24, 2025
@tcompa tcompa deleted the poetry-update branch June 24, 2025 08:29
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2 participants