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@ga4gh

Global Alliance for Genomics and Health

An international coalition, formed to enable the sharing of genomic and clinical data.

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  1. ga4gh-schemas ga4gh-schemas Public archive

    Models and APIs for Genomic data. RETIRED 2018-01-24

    Python 220 112

  2. benchmarking-tools benchmarking-tools Public

    Repository for the GA4GH Benchmarking Team work developing standardized benchmarking methods for germline small variant calls

    HTML 207 46

  3. ga4gh-server ga4gh-server Public archive

    Reference implementation of the APIs defined in ga4gh-schemas. RETIRED 2018-01-24

    Python 99 91

  4. phenopacket-schema phenopacket-schema Public

    Repository for the GA4GH phenopacket schema

    Java 96 31

  5. vrs vrs Public

    Extensible specification for representing and uniquely identifying biological sequence variation

    Jupyter Notebook 94 38

  6. task-execution-schemas task-execution-schemas Public

    93 30

Repositories

Showing 10 of 141 repositories
  • analytics-dashboard Public

    Embedded analytics dashboard on GA4GH metrics

    ga4gh/analytics-dashboard’s past year of commit activity
    Jupyter Notebook 1 0 9 5 Updated Feb 17, 2026
  • cat-vrs Public

    A terminology and data model for describing categorical variation concepts.

    ga4gh/cat-vrs’s past year of commit activity
    Makefile 5 Apache-2.0 4 24 3 Updated Feb 17, 2026
  • Genomic-sequencing-in-newborn-screening Public

    Developing a policy tool for those in the genomic newborn sequencing field to navigate ethical, legal, and social implications.

    ga4gh/Genomic-sequencing-in-newborn-screening’s past year of commit activity
    HTML 0 MIT 0 0 0 Updated Feb 17, 2026
  • va-spec-python Public

    GA4GH Variation Annotation Python Implementation

    ga4gh/va-spec-python’s past year of commit activity
    Python 2 Apache-2.0 1 4 3 Updated Feb 16, 2026
  • vrs Public

    Extensible specification for representing and uniquely identifying biological sequence variation

    ga4gh/vrs’s past year of commit activity
    Jupyter Notebook 94 Apache-2.0 38 32 (2 issues need help) 1 Updated Feb 13, 2026
  • cat-vrs-python Public

    GA4GH Categorical Variation Representation Python Implementation

    ga4gh/cat-vrs-python’s past year of commit activity
    Python 2 Apache-2.0 4 3 3 Updated Feb 13, 2026
  • va-spec Public

    An information model for representing variant annotations.

    ga4gh/va-spec’s past year of commit activity
    Jupyter Notebook 27 Apache-2.0 7 114 (1 issue needs help) 6 Updated Feb 13, 2026
  • vrs-python Public

    GA4GH Variation Representation Python Implementation

    ga4gh/vrs-python’s past year of commit activity
    Python 61 Apache-2.0 39 71 (1 issue needs help) 4 Updated Feb 13, 2026
  • quality-control-wgs Public

    GA4GH Quality Control of Whole Genome Sequencing's metrics definition, benchmark resources and reference implementations

    ga4gh/quality-control-wgs’s past year of commit activity
    Jupyter Notebook 21 Apache-2.0 6 5 1 Updated Feb 13, 2026
  • tool-registry-service-schemas Public

    APIs for discovering genomics tools, their metadata and their containers

    ga4gh/tool-registry-service-schemas’s past year of commit activity
    Shell 34 Apache-2.0 18 28 (2 issues need help) 2 Updated Feb 12, 2026
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