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Updating workflows/VGP-assembly-v2/hi-c-contact-map-for-assembly-manual-curation from 2.2 to 2.3#1202

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gxydevbot wants to merge 1 commit intogalaxyproject:mainfrom
planemo-autoupdate:workflows/VGP-assembly-v2/hi-c-contact-map-for-assembly-manual-curation
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Updating workflows/VGP-assembly-v2/hi-c-contact-map-for-assembly-manual-curation from 2.2 to 2.3#1202
gxydevbot wants to merge 1 commit intogalaxyproject:mainfrom
planemo-autoupdate:workflows/VGP-assembly-v2/hi-c-contact-map-for-assembly-manual-curation

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Hello! This is an automated update of the following workflow: workflows/VGP-assembly-v2/hi-c-contact-map-for-assembly-manual-curation. I created this PR because I think one or more of the component tools are out of date, i.e. there is a newer version available on the ToolShed.

By comparing with the latest versions available on the ToolShed, it seems the following tools are outdated:

  • toolshed.g2.bx.psu.edu/repos/iuc/collection_element_identifiers/collection_element_identifiers/0.0.2 should be updated to toolshed.g2.bx.psu.edu/repos/iuc/collection_element_identifiers/collection_element_identifiers/0.0.3
  • toolshed.g2.bx.psu.edu/repos/lparsons/cutadapt/cutadapt/5.2+galaxy1 should be updated to toolshed.g2.bx.psu.edu/repos/lparsons/cutadapt/cutadapt/5.2+galaxy2
  • toolshed.g2.bx.psu.edu/repos/iuc/multiqc/multiqc/1.33+galaxy0 should be updated to toolshed.g2.bx.psu.edu/repos/iuc/multiqc/multiqc/1.33+galaxy2
  • toolshed.g2.bx.psu.edu/repos/bgruening/gfastats/gfastats/1.3.11+galaxy1 should be updated to toolshed.g2.bx.psu.edu/repos/bgruening/gfastats/gfastats/1.3.11+galaxy2
  • toolshed.g2.bx.psu.edu/repos/iuc/minimap2/minimap2/2.28+galaxy2 should be updated to toolshed.g2.bx.psu.edu/repos/iuc/minimap2/minimap2/2.30+galaxy0
  • toolshed.g2.bx.psu.edu/repos/iuc/pretext_map/pretext_map/0.2.3+galaxy0 should be updated to toolshed.g2.bx.psu.edu/repos/iuc/pretext_map/pretext_map/0.2.4+galaxy0
  • toolshed.g2.bx.psu.edu/repos/devteam/column_maker/Add_a_column1/2.1 should be updated to toolshed.g2.bx.psu.edu/repos/devteam/column_maker/Add_a_column1/2.1+galaxy0
  • toolshed.g2.bx.psu.edu/repos/iuc/pretext_snapshot/pretext_snapshot/0.0.5+galaxy1 should be updated to toolshed.g2.bx.psu.edu/repos/iuc/pretext_snapshot/pretext_snapshot/0.0.7+galaxy0

The workflow release number has been updated from 2.2 to 2.3.

If you want to skip this change, close this PR without deleting the branch. It will be reopened if another change is detected.
Any commit from another author than 'planemo-autoupdate' will prevent more auto-updates.
To ignore manual changes and allow autoupdates, delete the branch.

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