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Hello! This is an automated update of the following workflow: workflows/scRNAseq/fastq-to-matrix-10x. I created this PR because I think one or more of the component tools are out of date, i.e. there is a newer version available on the ToolShed.

By comparing with the latest versions available on the ToolShed, it seems the following tools are outdated:

  • toolshed.g2.bx.psu.edu/repos/iuc/multiqc/multiqc/1.27+galaxy3 should be updated to toolshed.g2.bx.psu.edu/repos/iuc/multiqc/multiqc/1.27+galaxy4

The workflow release number has been updated from 0.6.3 to 0.6.4.

The workflow release number has been updated from 0.6.3 to 0.6.4.

If you want to skip this change, close this PR without deleting the branch. It will be reopened if another change is detected.
Any commit from another author than 'planemo-autoupdate' will prevent more auto-updates.
To ignore manual changes and allow autoupdates, delete the branch.

@gxydevbot gxydevbot changed the title Updating workflows/scRNAseq/fastq-to-matrix-10x from 0.6.3 to 0.6.4 Updating workflows/scRNAseq/fastq-to-matrix-10x from 0.6.3 to 0.6.4 Jan 19, 2026
@gxydevbot gxydevbot force-pushed the workflows/scRNAseq/fastq-to-matrix-10x branch from e8286df to 69a3800 Compare January 19, 2026 07:13
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There are new updates, they have been integrated to the PR, check the file diff.

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