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How to label intensity measurements coming from spots filtered out (outside of nuclei)?

Status: Open.

#49 In gerlichlab/reparafil;

· ines-prlesi opened on Sep 25, 2024

Switch from Apache <code>commons.math3</code> to <code>commons-statistics</code> once it's more stable.

priority low

refactor

Status: Open.

#33 In gerlichlab/reparafil;

· vreuter opened on Jun 11, 2024

We should convert to ZARR?

enhancementNew feature or requestNew feature or request

research required

Status: Open.

#29 In gerlichlab/reparafil;

· vreuter opened on May 30, 2024

Generalisation: accommodate automatic segmentation

enhancementNew feature or requestNew feature or request

priority high

Status: Open.

#27 In gerlichlab/reparafil;

· vreuter opened on May 29, 2024

·  

v0.7.0

We should version dynamically, and unify JVM and Python versions of project

infra

priority high

Status: Open.

#25 In gerlichlab/reparafil;

· vreuter opened on Apr 19, 2024

Get simpler dependency than full-blown Fiji / ImageJ for ROI functionality

infra

refactor

research required

Status: Open.

#20 In gerlichlab/reparafil;

· vreuter opened on Apr 18, 2024

Accommodate multi-timepoint

enhancementNew feature or requestNew feature or request

priority low

Status: Open.

#19 In gerlichlab/reparafil;

· vreuter opened on Apr 17, 2024

Add Scala formatter(s) and linter(s) to CI

infra

priority high

Status: Open.

#18 In gerlichlab/reparafil;

· vreuter opened on Apr 14, 2024

Accommodate more versions of ROI file format

questionFurther information is requestedFurther information is requested

Status: Open.

#5 In gerlichlab/reparafil;

· vreuter opened on Mar 20, 2024