Version 1.34.0

Improvements

• Add support for Python 3.14 (#2022, #2026)
• In Jupyter, set edge value of tilesource to transparent (#2019)
• When reading tiff files via the tiff or openslide reader, stop reading sooner if they are corrupt (#2037)
• Support two point warp correspondence in the multi-source (#2039)

Changes

• Refactored internal code to use contextlib.suppress where appropriate (#2031)
• Drop support for Python 3.9 (#2032)
• When converting images, associated images stored as jpegs will be YCbCr (#2043)

Bug Fixes

• When reading raw files via the PIL source, fix handling uint16 data (#2030)
• When copying an item via girder, ensure permissions on annotations are granted to the owner of the destination folder (#2033)
• The large_image/folder/{}/tiles endpoint didn't always handle partially complete items (#2038)

Version 1.33.5

Improvements

• Added a "pattern" property for polygon annotations (#2020)

Changes

• Change delattr to del when it doesn't matter (#2021)

Version 1.33.4

Improvements

• Remove locking in reading nd2 tiles (#1977)
• Get a pixel from multiple frames in a single REST call (#2002)
• Add another index to speed up deleting large images in Girder (#2005)

Changes

• Increase the detail threshold for large annotations (#1995)
• Update to work with tol-colors >= 2 (#2000)
• Load some sources earlier in Girder (#2004)
• Increase number of annotation elements processed for metadata plots (#2012)
• More listed mimetypes (#2013)
• Make it easier to rebind annotation models (#2014)

Bug Fixes

• Fixed recursion in the create large images in a folder endpoint (#1993)
• When overlaying many image annotations, some showed artifacts (#1998)
• Fix annotation caching with different users (#1999)
• Work around how bioformats handles DICOMs in Monochrome1 (#1834)
• Guard a missing data field in pixelmap annotation actions (#2010, #2011)
• Fixed an issue emitting geojson annotations with rotated rectangles and ellipses (#2015)

Version 1.33.3

Changes

• Handle a recent change in pylibtiff (#1992)

Version 1.33.2

Bug Fixes

• Fix some raw bson handling (#1991)

Version 1.33.1

Improvements

• Speed up annotation centroid queries (#1981, #1990)
• Improve large annotation load and display speed (#1982)
• Denormalize some values in the annotation collection to support improving display speed (#1984)
• Improve indices for annotationelement queries (#1985)
• Use some raw bson handling to speed up annotationelement serialization (#1986)
• Improve indices used in large image associated files in girder (#1988)

Changes

• Skip adjacent DICOM file search during Girder import (#1987)
• Update to work with the most recent wsidicom (#1989)

Bug Fixes

• Add a guard to avoid a javascript except if annotations are not loaded enough (#1983)

Version 1.33.0

Features

• Multi-source Thin Plate Spline Warping (#1947)
• Support subdatasets and frames in geospatial sources (#1972)

Improvements

• Improve reading certain tiles via tiff source (#1946)
• Clearer error messages on jsonschema issues in the multi source (#1951)
• Add an option to the image converter to preserve float datatypes (#1968)
• Specify that geospatial girder sources could be multi-file to better find adjacent files to a vrt (#1971)

Changes

• Do not check if items are used as annotation elements in DocumentDB (#1949, #1953)
• Ensure a valid gdal version (#1945)
• Drop support for Python 3.8 (#1950, #1957)
• Change some internals on how allowing netcdf files without scale are handled (#1970)

Bug Fixes

• Sometimes the annotation PATCH endpoint would report a duplicate ID (#1952)
• Harden reading ometiff that have certain planar configurations (#1956)
• If a tile is larger than expected, guard its size (#1955)
• Zarr Write: Prevent multiple values for the overwrite kwarg (#1965)
• Eliminate a javascript exception in the histogram viewer (#1967)

Version 1.32.11

Improvements

• Improve DocumentDB support (#1941)
• Generate a specific annotation revert notification in Girder (#1943)

Bug Fixes

• Fix updating annotation updated dates in the girder web client (#1942)
• Fix openslide reads at lower levels (#1944)

Version 1.32.10

Improvements

• Improve DocumentDB support (#1937)
• Better handle images with adjacent files in the same girder item (#1940)

Changes

• Move the pillow-jpls module out of common install extras (#1935)
• Change the reading method for some file conversions (#1939)

Version 1.32.9

Improvements

• Clearer error messages on bad annotations and don't keep the bad file (#1922)
• Annotation list checkboxes (#1884)
• The frame-viewer histogram widget will only be visible if it can be used (#1924)
• Add the dicom mime-type to the openslide source (#1925)
• Add a getGeospatialRegion function to tile sources (#1922)
• Add another index for annotation elements (#1928)
• Make the json representation of some annotation elements more compact (#1930)
• On the client internals, indicate which annotation updates are from fetches (#1931)
• Speed up old annotation maintenance query (#1934)

Bug Fixes

• Fix debouncing annotation saves (#1927)