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use modern ggplot2 labs idiom#264

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zkamvar merged 9 commits intomainfrom
znk/ggplot2-maintenance/263
Jun 19, 2025
Merged

use modern ggplot2 labs idiom#264
zkamvar merged 9 commits intomainfrom
znk/ggplot2-maintenance/263

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@zkamvar zkamvar commented Jun 16, 2025

This will fix #263

@zkamvar zkamvar mentioned this pull request Jun 16, 2025
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codecov bot commented Jun 16, 2025

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zkamvar commented Jun 17, 2025

le sigh

Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  aboot.Rd: genind, genpop, genlight-class
  bitwise.dist.Rd: genlight-class, genind-class
  bitwise.ia.Rd: genlight-class
  bootgen-class.Rd: gen-class
  bruvo.boot.Rd: genind, boot.phylo, nancycats, nj, nodelabels, tab
  bruvo.dist.Rd: genind
  bruvo.msn.Rd: genind, nancycats
  bruvomat-methods.Rd: genind-class
  clonecorrect.Rd: genind-class
  coercion-methods.Rd: genind-class, splitStrata
  diss.dist.Rd: genind
  diversity_ci.Rd: genind
  filter_stats.Rd: genind, genlight
  fix_replen.Rd: genind
  genclone-class.Rd: genind-class, genlight-class
  genclone-method.Rd: genind-class
  genetic_distance.Rd: genind-class, dist.genpop
  genind2genalex.Rd: genind-class
  genotype_curve.Rd: genind-class
  ia.Rd: import2genind
  info_table.Rd: genind-class
  informloci.Rd: genind-class
  is.clone.Rd: genind-class, genlight-class
  missingno.Rd: genind-class, tab
  MLG-accessors.Rd: genlight-class
  mlg.filter.Rd: genind-class
  mlg.Rd: ggplot
  pgen.Rd: strata
  plot_poppr_msn.Rd: genind-class, genlight-class
  poppr-package.Rd: genind-class, genlight-class
  poppr.amova.Rd: genind-class, genlight-class, strata, quasieuclid,
    lingoes, cailliez
  poppr.msn.Rd: genind, genlight, nancycats, nj, nodelabels, tab
  poppr.Rd: tab, strata, last_plot
  popsub.Rd: genind-class, genlight-class
  psex.Rd: strata
  read.genalex.Rd: genind, other, genind-class
  recode_polyploids.Rd: genind-class, genpop-class
  rraf.Rd: strata
  shufflepop.Rd: genind-class
  snpclone-coercion-methods.Rd: genlight-class
  snpclone-method.Rd: genlight-class
  test_replen.Rd: genind
  upgma.Rd: as.phylo
  win.ia.Rd: genlight-class

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zkamvar commented Jun 18, 2025

all of the ubuntu runners are failing because tinytex is having a hell of a time, but it has nothing to do with the package itself.

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zkamvar commented Jun 19, 2025

Dear maintainer,

thanks, package poppr_2.9.7.tar.gz is on its way to CRAN.

Best regards,
CRAN teams' auto-check service
Flavor: r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64
Check: *, Result: OK

@zkamvar zkamvar merged commit 0555de5 into main Jun 19, 2025
5 of 9 checks passed
@zkamvar zkamvar deleted the znk/ggplot2-maintenance/263 branch June 19, 2025 00:08
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