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added missing return command
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panaroo/generate_output.py

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@@ -443,6 +443,7 @@ def generate_core_genome_alignment(
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if len(core_genes) < 1:
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print("No gene clusters were present above the core frequency"
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" threshold! Try adjusting the '--core_threshold' parameter")
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return
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core_gene_names = [G.nodes[x]["name"] for x in core_genes]
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