Skip to content
Draft
Changes from all commits
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
21 changes: 21 additions & 0 deletions src/hdmf/common/table.py
Original file line number Diff line number Diff line change
Expand Up @@ -11,8 +11,10 @@
import numpy as np
import pandas as pd
import itertools
from typing import Type

from . import register_class, EXP_NAMESPACE
from ..backends.hdf5.h5_utils import H5DataIO
from ..container import Container, Data
from ..data_utils import DataIO, AbstractDataChunkIterator
from ..utils import docval, getargs, ExtenderMeta, popargs, pystr, AllowPositional, check_type
Expand Down Expand Up @@ -1323,6 +1325,25 @@ def copy(self):
colnames=self.colnames)
return self.__class__(**kwargs)

def make_expandable(self, data_io_class: Type[DataIO] = H5DataIO, data_io_kwargs: dict = None):
"""

Parameters
----------
data_io_class: Type[DataIO], default=H5DataIO
data_io_kwargs: dict, optional
Keyword arguments to pass to the data_io_class. If None, defaults to dict(shape=(None, *data.shape[1:]))
"""

if data_io_kwargs is None:
data_io_kwargs = dict()

for column in self.columns + [self.id]:
shape = column.data.shape
kwargs = dict(shape=(None, *shape[1:]))
kwargs.update(**data_io_kwargs)
column.set_data_io(data_io_class=data_io_class, data_io_kwargs=kwargs)


@register_class('DynamicTableRegion')
class DynamicTableRegion(VectorData):
Expand Down