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Dec 7, 2024
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Auto Update Modules [6 December 2024, 15:43] #805

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2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/data/json_data.json
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2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/data/json_data_detail.json
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2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/BLAST+.md
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Expand Up @@ -21,7 +21,7 @@ module load BLAST+/2.14.1-gompi-2023a

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|BLAST+/2.14.1-gompi-2023a|-|x|x|x|x|x|x|
|BLAST+/2.14.1-gompi-2023a|x|x|x|x|x|x|x|
|BLAST+/2.14.0-gompi-2022b|-|x|x|x|-|-|-|
|BLAST+/2.13.0-gompi-2022a|-|x|x|x|-|-|-|
|BLAST+/2.12.0-gompi-2021b|-|x|x|x|-|-|-|
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2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/CD-HIT.md
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Expand Up @@ -22,7 +22,7 @@ module load CD-HIT/4.8.1-iccifort-2019.5.281
| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|CD-HIT/4.8.1-iccifort-2019.5.281|-|x|x|-|-|-|-|
|CD-HIT/4.8.1-GCC-12.3.0|x|x|x|x|-|x|x|
|CD-HIT/4.8.1-GCC-12.3.0|x|x|x|x|x|x|x|
|CD-HIT/4.8.1-GCC-12.2.0|-|x|x|x|-|-|-|
|CD-HIT/4.8.1-GCC-11.2.0|-|x|x|-|-|-|-|
|CD-HIT/4.8.1-GCC-10.2.0|-|x|x|x|-|-|-|
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3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/Clang.md
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Expand Up @@ -14,13 +14,14 @@ The overview below shows which Clang installations are available per HPC-UGent T
To start using Clang, load one of these modules using a `module load` command like:

```shell
module load Clang/17.0.0_20230515-GCCcore-12.3.0-CUDA-12.1.1
module load Clang/17.0.6-GCCcore-13.2.0
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|Clang/17.0.6-GCCcore-13.2.0|-|x|-|x|-|-|-|
|Clang/17.0.0_20230515-GCCcore-12.3.0-CUDA-12.1.1|x|-|x|-|x|-|-|
|Clang/16.0.6-GCCcore-12.3.0|x|x|x|x|x|x|x|
|Clang/16.0.4-GCCcore-12.2.0|-|x|x|x|-|x|-|
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4 changes: 3 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/Java.md
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Expand Up @@ -14,14 +14,16 @@ The overview below shows which Java installations are available per HPC-UGent Ti
To start using Java, load one of these modules using a `module load` command like:

```shell
module load Java/21.0.2
module load Java/21.0.5
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|Java/21.0.5|x|-|-|-|-|-|x|
|Java/21.0.2|-|x|x|x|-|x|-|
|Java/21(@Java/21.0.5)|x|-|-|-|-|-|x|
|Java/21(@Java/21.0.2)|-|x|x|x|-|x|-|
|Java/17.0.6|x|x|x|x|-|x|x|
|Java/17(@Java/17.0.6)|x|x|x|x|-|x|x|
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2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/LMDB.md
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Expand Up @@ -21,7 +21,7 @@ module load LMDB/0.9.31-GCCcore-12.3.0

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|LMDB/0.9.31-GCCcore-12.3.0|-|x|x|x|x|x|x|
|LMDB/0.9.31-GCCcore-12.3.0|x|x|x|x|x|x|x|
|LMDB/0.9.29-GCCcore-12.2.0|-|x|x|x|-|-|-|
|LMDB/0.9.29-GCCcore-11.3.0|-|x|x|x|-|-|-|
|LMDB/0.9.29-GCCcore-11.2.0|-|x|x|x|-|-|-|
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2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/MATLAB.md
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Expand Up @@ -21,6 +21,6 @@ module load MATLAB/2022b-r5

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|MATLAB/2022b-r5|-|x|x|x|-|x|-|
|MATLAB/2022b-r5|x|x|x|x|-|x|-|
|MATLAB/2021b|-|x|x|-|-|-|-|
|MATLAB/2019b|-|x|x|-|-|-|-|
2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/NanoFilt.md
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Expand Up @@ -21,5 +21,5 @@ module load NanoFilt/2.8.0-foss-2023a

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|NanoFilt/2.8.0-foss-2023a|-|x|x|x|-|x|x|
|NanoFilt/2.8.0-foss-2023a|x|x|x|x|x|x|x|
|NanoFilt/2.6.0-intel-2019b-Python-3.7.4|-|x|x|-|-|-|-|
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/Nextflow.md
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Expand Up @@ -14,13 +14,14 @@ The overview below shows which Nextflow installations are available per HPC-UGen
To start using Nextflow, load one of these modules using a `module load` command like:

```shell
module load Nextflow/24.04.2
module load Nextflow/24.10.2
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|Nextflow/24.10.2|x|x|x|x|-|x|x|
|Nextflow/24.04.2|x|x|x|x|-|x|x|
|Nextflow/23.10.0|-|x|x|x|-|-|-|
|Nextflow/23.04.2|-|x|x|x|-|-|-|
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24 changes: 24 additions & 0 deletions mkdocs/docs/HPC/only/gent/available_software/detail/PyHMMER.md
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---
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- toc
---

PyHMMER
=======

# Available modules


The overview below shows which PyHMMER installations are available per HPC-UGent Tier-2 cluster, ordered based on software version (new to old).

To start using PyHMMER, load one of these modules using a `module load` command like:

```shell
module load PyHMMER/0.10.15-gompi-2023b
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|PyHMMER/0.10.15-gompi-2023b|-|x|x|x|-|x|x|
24 changes: 24 additions & 0 deletions mkdocs/docs/HPC/only/gent/available_software/detail/RAPIDS.md
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---
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RAPIDS
======

# Available modules


The overview below shows which RAPIDS installations are available per HPC-UGent Tier-2 cluster, ordered based on software version (new to old).

To start using RAPIDS, load one of these modules using a `module load` command like:

```shell
module load RAPIDS/24.4-foss-2023a-CUDA-12.1.1
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|RAPIDS/24.4-foss-2023a-CUDA-12.1.1|x|-|-|-|-|-|-|
2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/RDKit.md
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Expand Up @@ -21,7 +21,7 @@ module load RDKit/2024.03.3-foss-2023a

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|RDKit/2024.03.3-foss-2023a|-|x|x|x|-|x|x|
|RDKit/2024.03.3-foss-2023a|x|x|x|x|-|x|x|
|RDKit/2022.09.4-foss-2022a|-|x|x|x|-|-|-|
|RDKit/2022.03.5-foss-2021b|-|x|x|-|-|-|-|
|RDKit/2020.09.3-foss-2019b-Python-3.7.4|-|x|x|-|-|-|-|
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2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/Z3.md
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Expand Up @@ -21,7 +21,7 @@ module load Z3/4.13.0-GCCcore-13.2.0

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|Z3/4.13.0-GCCcore-13.2.0|-|x|x|x|-|x|x|
|Z3/4.13.0-GCCcore-13.2.0|x|x|x|x|-|x|x|
|Z3/4.12.2-GCCcore-12.3.0-Python-3.11.3|-|x|x|x|-|-|-|
|Z3/4.12.2-GCCcore-12.3.0|x|x|x|x|x|x|x|
|Z3/4.12.2-GCCcore-12.2.0-Python-3.10.8|-|x|x|x|-|-|-|
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---
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---

bakta
=====

# Available modules


The overview below shows which bakta installations are available per HPC-UGent Tier-2 cluster, ordered based on software version (new to old).

To start using bakta, load one of these modules using a `module load` command like:

```shell
module load bakta/1.10.1-foss-2023b
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|bakta/1.10.1-foss-2023b|-|x|x|x|-|x|x|
2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/cpio.md
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Expand Up @@ -21,4 +21,4 @@ module load cpio/2.15-GCCcore-12.3.0

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|cpio/2.15-GCCcore-12.3.0|-|-|-|-|x|-|x|
|cpio/2.15-GCCcore-12.3.0|x|-|-|-|x|-|x|
2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/cutadapt.md
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Expand Up @@ -21,7 +21,7 @@ module load cutadapt/4.9-GCCcore-12.3.0

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|cutadapt/4.9-GCCcore-12.3.0|-|x|x|x|-|x|x|
|cutadapt/4.9-GCCcore-12.3.0|x|x|x|x|x|x|x|
|cutadapt/4.2-GCCcore-11.3.0|-|x|x|x|-|-|-|
|cutadapt/3.5-GCCcore-11.2.0|-|x|x|-|-|-|-|
|cutadapt/3.4-GCCcore-10.2.0|-|x|x|x|-|-|-|
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2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/decona.md
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Expand Up @@ -21,5 +21,5 @@ module load decona/1.4-20240731-foss-2023a

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|decona/1.4-20240731-foss-2023a|-|x|x|x|-|x|x|
|decona/1.4-20240731-foss-2023a|x|x|x|x|x|x|x|
|decona/0.1.2-foss-2019b-Python-3.7.4|-|x|x|-|-|-|-|
2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/jedi.md
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Expand Up @@ -22,4 +22,4 @@ module load jedi/0.19.1-GCCcore-13.2.0
| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|jedi/0.19.1-GCCcore-13.2.0|-|x|x|x|-|x|x|
|jedi/0.19.0-GCCcore-12.3.0|x|-|-|-|-|-|-|
|jedi/0.19.0-GCCcore-12.3.0|x|-|x|-|x|-|-|
2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/makeinfo.md
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Expand Up @@ -22,7 +22,7 @@ module load makeinfo/7.1-GCCcore-13.2.0
| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|makeinfo/7.1-GCCcore-13.2.0|-|x|x|x|-|x|x|
|makeinfo/7.0.3-GCCcore-12.3.0|-|x|x|x|x|-|x|
|makeinfo/7.0.3-GCCcore-12.3.0|x|x|x|x|x|-|x|
|makeinfo/6.7-GCCcore-10.3.0-minimal|-|x|x|x|-|-|-|
|makeinfo/6.7-GCCcore-10.3.0|-|x|x|-|-|-|-|
|makeinfo/6.7-GCCcore-10.2.0-minimal|-|x|x|x|-|-|-|
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2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/medaka.md
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Expand Up @@ -25,7 +25,7 @@ module load medaka/1.12.1-foss-2023a-CUDA-12.1.1
|medaka/1.12.1-foss-2023a|-|x|x|x|-|x|x|
|medaka/1.12.0-foss-2023a-CUDA-12.1.1|x|-|x|-|x|-|-|
|medaka/1.12.0-foss-2023a|-|x|x|x|-|x|x|
|medaka/1.11.3-foss-2023a|-|x|x|x|-|x|x|
|medaka/1.11.3-foss-2023a|x|x|x|x|x|x|x|
|medaka/1.11.3-foss-2022a|-|x|x|x|-|-|-|
|medaka/1.9.1-foss-2022a|-|x|x|x|-|-|-|
|medaka/1.8.1-foss-2022a|-|x|x|x|-|-|-|
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2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/pigz.md
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Expand Up @@ -21,7 +21,7 @@ module load pigz/2.8-GCCcore-12.3.0

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|pigz/2.8-GCCcore-12.3.0|-|x|x|x|x|x|x|
|pigz/2.8-GCCcore-12.3.0|x|x|x|x|x|x|x|
|pigz/2.7-GCCcore-11.3.0|-|x|x|x|-|-|-|
|pigz/2.6-GCCcore-11.2.0|-|x|x|x|-|-|-|
|pigz/2.6-GCCcore-10.2.0|-|x|x|x|-|-|-|
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3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/psutil.md
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Expand Up @@ -14,11 +14,12 @@ The overview below shows which psutil installations are available per HPC-UGent
To start using psutil, load one of these modules using a `module load` command like:

```shell
module load psutil/5.9.5-GCCcore-12.2.0
module load psutil/6.1.0-GCCcore-13.2.0
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|psutil/6.1.0-GCCcore-13.2.0|-|x|x|x|-|x|x|
|psutil/5.9.5-GCCcore-12.2.0|-|x|x|x|-|-|-|
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/python-isal.md
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Expand Up @@ -14,13 +14,14 @@ The overview below shows which python-isal installations are available per HPC-U
To start using python-isal, load one of these modules using a `module load` command like:

```shell
module load python-isal/1.1.0-GCCcore-12.3.0
module load python-isal/1.6.1-GCCcore-13.2.0
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|python-isal/1.6.1-GCCcore-13.2.0|-|x|x|x|-|x|x|
|python-isal/1.1.0-GCCcore-12.3.0|x|x|x|x|x|x|x|
|python-isal/1.1.0-GCCcore-11.3.0|-|x|x|x|-|-|-|
|python-isal/0.11.1-GCCcore-11.2.0|-|x|x|-|-|-|-|
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2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/qcat.md
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Expand Up @@ -23,5 +23,5 @@ module load qcat/1.1.0-intel-2020a-Python-3.8.2
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|qcat/1.1.0-intel-2020a-Python-3.8.2|-|x|x|-|-|-|-|
|qcat/1.1.0-intel-2019b-Python-3.7.4|-|x|x|-|-|-|-|
|qcat/1.1.0-foss-2023a|-|x|x|x|-|x|x|
|qcat/1.1.0-foss-2023a|x|x|x|x|x|x|x|
|qcat/1.1.0-foss-2019b-Python-3.7.4|-|x|x|-|-|-|-|
24 changes: 24 additions & 0 deletions mkdocs/docs/HPC/only/gent/available_software/detail/versioningit.md
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---
hide:
- toc
---

versioningit
============

# Available modules


The overview below shows which versioningit installations are available per HPC-UGent Tier-2 cluster, ordered based on software version (new to old).

To start using versioningit, load one of these modules using a `module load` command like:

```shell
module load versioningit/3.1.2-GCCcore-13.2.0
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|versioningit/3.1.2-GCCcore-13.2.0|-|x|x|x|-|x|x|
2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/wradlib.md
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Expand Up @@ -21,4 +21,4 @@ module load wradlib/2.0.3-foss-2023a

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|wradlib/2.0.3-foss-2023a|-|x|-|-|-|-|x|
|wradlib/2.0.3-foss-2023a|-|x|x|-|-|-|x|
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/zlib-ng.md
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Expand Up @@ -14,12 +14,13 @@ The overview below shows which zlib-ng installations are available per HPC-UGent
To start using zlib-ng, load one of these modules using a `module load` command like:

```shell
module load zlib-ng/2.1.6-GCCcore-12.3.0
module load zlib-ng/2.2.2-GCCcore-13.2.0
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|zlib-ng/2.2.2-GCCcore-13.2.0|-|x|x|x|-|x|x|
|zlib-ng/2.1.6-GCCcore-12.3.0|x|x|x|x|x|x|x|
|zlib-ng/2.0.7-GCCcore-11.3.0|-|x|x|x|-|-|-|
2 changes: 1 addition & 1 deletion mkdocs/extra/gent.yml
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Expand Up @@ -16,7 +16,7 @@ hpcname: hpcugent
loginnode: login.hpc.ugent.be
loginhost: gligar07.gastly.os
altloginhost: gligar08.gastly.os
modules_last_updated: Tue, 03 Dec 2024 at 15:44:40 CET # This line is automatically updated by scripts/available_modules/available_modules.py
modules_last_updated: Fri, 06 Dec 2024 at 15:44:40 CET # This line is automatically updated by scripts/available_modules/available_modules.py
# get these with ssh-keyscan gligar01.ugent.be > file
# ssh-keygen -l -f file
# ssh-keygen -l -f file -E md5
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