Skip to content

Auto Update Modules [18 February 2025, 15:43] #867

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Merged
merged 1 commit into from
Feb 18, 2025
Merged

Auto Update Modules [18 February 2025, 15:43] #867

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
1 commit
Select commit
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/data/json_data.json
View file
Open in desktop

Large diffs are not rendered by default.

2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/data/json_data_detail.json
View file
Open in desktop

Large diffs are not rendered by default.

2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/BWA.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -22,7 +22,7 @@ module load BWA/0.7.17-iccifort-2019.5.281
| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|BWA/0.7.17-iccifort-2019.5.281|-|x|-|-|-|-|-|
|BWA/0.7.17-GCCcore-12.3.0|x|x|x|x|-|x|x|
|BWA/0.7.17-GCCcore-12.3.0|x|x|x|x|x|x|x|
|BWA/0.7.17-GCCcore-12.2.0|-|x|x|x|-|-|-|
|BWA/0.7.17-GCCcore-11.3.0|-|x|x|x|-|x|-|
|BWA/0.7.17-GCCcore-11.2.0|-|x|x|x|-|-|-|
Expand Down
2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/Cbc.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -21,5 +21,5 @@ module load Cbc/2.10.11-foss-2023a

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|Cbc/2.10.11-foss-2023a|-|x|x|x|-|x|x|
|Cbc/2.10.11-foss-2023a|-|x|x|x|x|x|x|
|Cbc/2.10.5-foss-2022b|-|x|x|x|-|-|-|
2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/Cgl.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -21,5 +21,5 @@ module load Cgl/0.60.8-foss-2023a

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|Cgl/0.60.8-foss-2023a|-|x|x|x|-|x|x|
|Cgl/0.60.8-foss-2023a|-|x|x|x|x|x|x|
|Cgl/0.60.7-foss-2022b|-|x|x|x|-|-|-|
2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/Clp.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -21,6 +21,6 @@ module load Clp/1.17.9-foss-2023a

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|Clp/1.17.9-foss-2023a|-|x|x|x|-|x|x|
|Clp/1.17.9-foss-2023a|-|x|x|x|x|x|x|
|Clp/1.17.8-foss-2022b|-|x|x|x|-|-|-|
|Clp/1.17.7-foss-2021b|-|x|x|-|-|-|-|
2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/CoinUtils.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -21,6 +21,6 @@ module load CoinUtils/2.11.10-GCC-12.3.0

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|CoinUtils/2.11.10-GCC-12.3.0|x|x|x|x|-|x|x|
|CoinUtils/2.11.10-GCC-12.3.0|x|x|x|x|x|x|x|
|CoinUtils/2.11.9-GCC-12.2.0|-|x|x|x|-|-|-|
|CoinUtils/2.11.6-GCC-11.2.0|-|x|x|-|-|-|-|
24 changes: 24 additions & 0 deletions mkdocs/docs/HPC/only/gent/available_software/detail/GraphAligner.md
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -0,0 +1,24 @@
---
hide:
- toc
---

GraphAligner
============

# Available modules


The overview below shows which GraphAligner installations are available per HPC-UGent Tier-2 cluster, ordered based on software version (new to old).

To start using GraphAligner, load one of these modules using a `module load` command like:

```shell
module load GraphAligner/1.0.20-foss-2023a
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|GraphAligner/1.0.20-foss-2023a|-|x|x|x|x|x|x|
24 changes: 24 additions & 0 deletions mkdocs/docs/HPC/only/gent/available_software/detail/Leptonica.md
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -0,0 +1,24 @@
---
hide:
- toc
---

Leptonica
=========

# Available modules


The overview below shows which Leptonica installations are available per HPC-UGent Tier-2 cluster, ordered based on software version (new to old).

To start using Leptonica, load one of these modules using a `module load` command like:

```shell
module load Leptonica/1.85.0-GCCcore-13.3.0
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|Leptonica/1.85.0-GCCcore-13.3.0|-|x|x|x|-|x|x|
2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/MUMPS.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -22,7 +22,7 @@ module load MUMPS/5.6.1-gomkl-2023a-metis-seq
| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|MUMPS/5.6.1-gomkl-2023a-metis-seq|-|x|x|x|-|x|x|
|MUMPS/5.6.1-foss-2023a-metis|-|x|x|x|-|x|x|
|MUMPS/5.6.1-foss-2023a-metis|-|x|x|x|x|x|x|
|MUMPS/5.6.1-foss-2022b-metis|-|x|x|x|-|-|-|
|MUMPS/5.5.1-foss-2022a-metis|-|x|x|x|-|-|-|
|MUMPS/5.4.1-intel-2021b-metis|-|x|x|x|-|-|-|
Expand Down
24 changes: 24 additions & 0 deletions mkdocs/docs/HPC/only/gent/available_software/detail/MashMap.md
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -0,0 +1,24 @@
---
hide:
- toc
---

MashMap
=======

# Available modules


The overview below shows which MashMap installations are available per HPC-UGent Tier-2 cluster, ordered based on software version (new to old).

To start using MashMap, load one of these modules using a `module load` command like:

```shell
module load MashMap/3.1.3-GCC-12.3.0
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|MashMap/3.1.3-GCC-12.3.0|-|x|x|x|x|x|x|
2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/Osi.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -21,6 +21,6 @@ module load Osi/0.108.9-GCC-12.3.0

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|Osi/0.108.9-GCC-12.3.0|-|x|x|x|-|x|x|
|Osi/0.108.9-GCC-12.3.0|-|x|x|x|x|x|x|
|Osi/0.108.8-GCC-12.2.0|-|x|x|x|-|-|-|
|Osi/0.108.7-GCC-11.2.0|-|x|x|-|-|-|-|
2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/PuLP.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -21,5 +21,5 @@ module load PuLP/2.8.0-foss-2023a

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|PuLP/2.8.0-foss-2023a|-|x|x|x|-|x|x|
|PuLP/2.8.0-foss-2023a|-|x|x|x|x|x|x|
|PuLP/2.7.0-foss-2022b|-|x|x|x|-|-|-|
24 changes: 24 additions & 0 deletions mkdocs/docs/HPC/only/gent/available_software/detail/Verkko.md
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -0,0 +1,24 @@
---
hide:
- toc
---

Verkko
======

# Available modules


The overview below shows which Verkko installations are available per HPC-UGent Tier-2 cluster, ordered based on software version (new to old).

To start using Verkko, load one of these modules using a `module load` command like:

```shell
module load Verkko/2.2.1-foss-2023a
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|Verkko/2.2.1-foss-2023a|-|x|x|x|x|x|x|
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/Winnowmap.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -14,11 +14,12 @@ The overview below shows which Winnowmap installations are available per HPC-UGe
To start using Winnowmap, load one of these modules using a `module load` command like:

```shell
module load Winnowmap/1.0-GCC-8.3.0
module load Winnowmap/2.03-GCCcore-12.3.0
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|Winnowmap/2.03-GCCcore-12.3.0|-|x|x|x|x|x|x|
|Winnowmap/1.0-GCC-8.3.0|-|x|-|-|-|-|-|
2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/libnsl.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -21,4 +21,4 @@ module load libnsl/2.0.1-GCCcore-12.3.0

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|libnsl/2.0.1-GCCcore-12.3.0|-|x|x|x|-|x|x|
|libnsl/2.0.1-GCCcore-12.3.0|-|x|x|x|x|x|x|
1 change: 1 addition & 0 deletions mkdocs/docs/HPC/only/gent/available_software/detail/sdsl-lite.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -22,3 +22,4 @@ module load sdsl-lite/2.1.1-foss-2023a
| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|sdsl-lite/2.1.1-foss-2023a|x|x|x|x|x|x|x|
|sdsl-lite/2.0.3-GCCcore-12.3.0|-|x|x|x|x|x|x|
2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/seqtk.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -21,7 +21,7 @@ module load seqtk/1.4-GCC-12.3.0

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|seqtk/1.4-GCC-12.3.0|-|x|x|x|-|x|x|
|seqtk/1.4-GCC-12.3.0|-|x|x|x|x|x|x|
|seqtk/1.3-GCC-11.2.0|-|x|x|-|-|-|-|
|seqtk/1.3-GCC-10.2.0|-|x|x|x|-|-|-|
|seqtk/1.3-GCC-8.3.0|-|x|x|-|-|-|-|
2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/snakemake.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -21,7 +21,7 @@ module load snakemake/8.4.2-foss-2023a

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|snakemake/8.4.2-foss-2023a|-|x|x|x|-|x|x|
|snakemake/8.4.2-foss-2023a|-|x|x|x|x|x|x|
|snakemake/7.32.3-foss-2022b|-|x|x|x|-|-|-|
|snakemake/7.22.0-foss-2022a|-|x|x|x|-|-|-|
|snakemake/7.18.2-foss-2021b|-|x|x|-|-|-|-|
Expand Down
24 changes: 24 additions & 0 deletions mkdocs/docs/HPC/only/gent/available_software/detail/tesseract.md
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -0,0 +1,24 @@
---
hide:
- toc
---

tesseract
=========

# Available modules


The overview below shows which tesseract installations are available per HPC-UGent Tier-2 cluster, ordered based on software version (new to old).

To start using tesseract, load one of these modules using a `module load` command like:

```shell
module load tesseract/5.5.0-GCCcore-13.3.0
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|tesseract/5.5.0-GCCcore-13.3.0|-|x|x|x|-|x|x|
2 changes: 1 addition & 1 deletion mkdocs/extra/gent.yml
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -16,7 +16,7 @@ hpcname: hpcugent
loginnode: login.hpc.ugent.be
loginhost: gligar07.gastly.os
altloginhost: gligar08.gastly.os
modules_last_updated: Sat, 15 Feb 2025 at 15:45:20 CET # This line is automatically updated by scripts/available_modules/available_modules.py
modules_last_updated: Tue, 18 Feb 2025 at 15:45:11 CET # This line is automatically updated by scripts/available_modules/available_modules.py
# get these with ssh-keyscan gligar01.ugent.be > file
# ssh-keygen -l -f file
# ssh-keygen -l -f file -E md5
Expand Down
Loading