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merged 1 commit into from
Apr 2, 2025
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Auto Update Modules [2 April 2025, 15:43] #913

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2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/data/json_data.json
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2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/AUGUSTUS.md
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Expand Up @@ -21,4 +21,4 @@ module load AUGUSTUS/3.5.0-foss-2023a

| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|AUGUSTUS/3.5.0-foss-2023a|-|x|x|x|x|x|x|
|AUGUSTUS/3.5.0-foss-2023a|x|x|x|x|x|x|x|
25 changes: 25 additions & 0 deletions mkdocs/docs/HPC/only/gent/available_software/detail/BBMap.md
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BBMap
=====

# Available modules


The overview below shows which BBMap installations are available per HPC-UGent Tier-2 cluster, ordered based on software version (new to old).

To start using BBMap, load one of these modules using a `module load` command like:

```shell
module load BBMap/39.19-GCC-13.3.0
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|BBMap/39.19-GCC-13.3.0|x|x|x|x|x|x|x|
|BBMap/39.19-GCC-12.3.0|x|x|x|x|x|x|x|
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/BWA.md
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Expand Up @@ -14,13 +14,14 @@ The overview below shows which BWA installations are available per HPC-UGent Tie
To start using BWA, load one of these modules using a `module load` command like:

```shell
module load BWA/0.7.18-GCCcore-13.2.0
module load BWA/0.7.18-GCCcore-13.3.0
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|BWA/0.7.18-GCCcore-13.3.0|x|x|x|x|x|x|x|
|BWA/0.7.18-GCCcore-13.2.0|x|x|x|x|x|x|x|
|BWA/0.7.17-GCCcore-12.3.0|x|x|x|x|x|x|x|
|BWA/0.7.17-GCCcore-11.3.0|-|-|-|-|-|x|x|
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/Biopython.md
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Expand Up @@ -14,13 +14,14 @@ The overview below shows which Biopython installations are available per HPC-UGe
To start using Biopython, load one of these modules using a `module load` command like:

```shell
module load Biopython/1.84-foss-2023b
module load Biopython/1.84-foss-2024a
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|Biopython/1.84-foss-2024a|x|x|x|x|x|x|x|
|Biopython/1.84-foss-2023b|x|x|x|x|x|x|x|
|Biopython/1.83-foss-2023a|x|x|x|x|x|x|x|
|Biopython/1.79-foss-2022a|-|-|-|-|-|x|x|
24 changes: 24 additions & 0 deletions mkdocs/docs/HPC/only/gent/available_software/detail/Bismark.md
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Bismark
=======

# Available modules


The overview below shows which Bismark installations are available per HPC-UGent Tier-2 cluster, ordered based on software version (new to old).

To start using Bismark, load one of these modules using a `module load` command like:

```shell
module load Bismark/0.24.2-GCC-12.3.0
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|Bismark/0.24.2-GCC-12.3.0|x|x|x|x|x|x|x|
5 changes: 3 additions & 2 deletions mkdocs/docs/HPC/only/gent/available_software/detail/Boltz-1.md
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Expand Up @@ -14,11 +14,12 @@ The overview below shows which Boltz-1 installations are available per HPC-UGent
To start using Boltz-1, load one of these modules using a `module load` command like:

```shell
module load Boltz-1/0.4.1-foss-2023a
module load Boltz-1/0.4.1-foss-2023a-CUDA-12.1.1
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|Boltz-1/0.4.1-foss-2023a|x|x|x|-|x|x|x|
|Boltz-1/0.4.1-foss-2023a-CUDA-12.1.1|x|-|x|-|x|x|-|
|Boltz-1/0.4.1-foss-2023a|x|x|x|x|x|x|x|
1 change: 1 addition & 0 deletions mkdocs/docs/HPC/only/gent/available_software/detail/Brotli-python.md
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Expand Up @@ -22,3 +22,4 @@ module load Brotli-python/1.1.0-GCCcore-13.2.0
| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|Brotli-python/1.1.0-GCCcore-13.2.0|x|x|x|x|x|x|x|
|Brotli-python/1.0.9-GCCcore-12.3.0|-|x|x|x|x|x|x|
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/CapnProto.md
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Expand Up @@ -14,11 +14,12 @@ The overview below shows which CapnProto installations are available per HPC-UGe
To start using CapnProto, load one of these modules using a `module load` command like:

```shell
module load CapnProto/1.0.1-GCCcore-12.3.0
module load CapnProto/1.1.0-GCCcore-13.3.0
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|CapnProto/1.1.0-GCCcore-13.3.0|x|x|x|x|x|x|x|
|CapnProto/1.0.1-GCCcore-12.3.0|x|x|x|x|x|x|x|
2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/Cython.md
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Expand Up @@ -24,4 +24,4 @@ module load Cython/3.0.10-GCCcore-13.3.0
|Cython/3.0.10-GCCcore-13.3.0|x|x|x|x|x|x|x|
|Cython/3.0.10-GCCcore-13.2.0|x|x|x|x|x|x|x|
|Cython/3.0.8-GCCcore-12.3.0|x|x|x|x|x|x|x|
|Cython/3.0.7-GCCcore-12.3.0|x|x|x|x|x|-|-|
|Cython/3.0.7-GCCcore-12.3.0|x|x|x|x|x|x|x|
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/DIAMOND.md
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Expand Up @@ -14,13 +14,14 @@ The overview below shows which DIAMOND installations are available per HPC-UGent
To start using DIAMOND, load one of these modules using a `module load` command like:

```shell
module load DIAMOND/2.1.9-GCC-13.2.0
module load DIAMOND/2.1.11-GCC-13.3.0
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|DIAMOND/2.1.11-GCC-13.3.0|x|x|x|x|x|x|x|
|DIAMOND/2.1.9-GCC-13.2.0|x|x|x|x|x|-|-|
|DIAMOND/2.1.8-GCC-12.3.0|x|x|x|x|x|x|x|
|DIAMOND/2.1.8-GCC-12.2.0|-|-|-|-|-|x|x|
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/Exonerate.md
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Expand Up @@ -14,11 +14,12 @@ The overview below shows which Exonerate installations are available per HPC-UGe
To start using Exonerate, load one of these modules using a `module load` command like:

```shell
module load Exonerate/2.4.0-GCC-12.3.0
module load Exonerate/2.4.0-GCC-13.3.0
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|Exonerate/2.4.0-GCC-13.3.0|x|x|x|x|x|x|x|
|Exonerate/2.4.0-GCC-12.3.0|x|x|x|x|x|x|x|
24 changes: 24 additions & 0 deletions mkdocs/docs/HPC/only/gent/available_software/detail/FLASH.md
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FLASH
=====

# Available modules


The overview below shows which FLASH installations are available per HPC-UGent Tier-2 cluster, ordered based on software version (new to old).

To start using FLASH, load one of these modules using a `module load` command like:

```shell
module load FLASH/2.2.00-GCCcore-13.3.0
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|FLASH/2.2.00-GCCcore-13.3.0|x|x|x|x|x|x|x|
2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/Gblocks.md
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Expand Up @@ -21,4 +21,4 @@ module load Gblocks/0.91b

| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|Gblocks/0.91b|x|x|-|x|-|-|-|
|Gblocks/0.91b|x|x|x|x|x|x|x|
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Hybpiper
========

# Available modules


The overview below shows which Hybpiper installations are available per HPC-UGent Tier-2 cluster, ordered based on software version (new to old).

To start using Hybpiper, load one of these modules using a `module load` command like:

```shell
module load Hybpiper/2.3.2-foss-2024a
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|Hybpiper/2.3.2-foss-2024a|x|x|x|x|x|x|x|
2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/Hydra.md
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Expand Up @@ -22,4 +22,4 @@ module load Hydra/1.3.2-foss-2023a-with-plugins
| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|Hydra/1.3.2-foss-2023a-with-plugins|x|x|x|x|x|x|x|
|Hydra/1.3.2-GCCcore-12.3.0|x|x|x|-|x|x|x|
|Hydra/1.3.2-GCCcore-12.3.0|x|x|x|x|x|x|x|
2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/IGV.md
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Expand Up @@ -22,4 +22,4 @@ module load IGV/2.19.1-Java-17
| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|IGV/2.19.1-Java-17|x|-|-|-|-|x|x|
|IGV/2.16.0-Java-11|x|x|-|x|-|x|x|
|IGV/2.16.0-Java-11|x|x|x|x|x|x|x|
24 changes: 24 additions & 0 deletions mkdocs/docs/HPC/only/gent/available_software/detail/KMC.md
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KMC
===

# Available modules


The overview below shows which KMC installations are available per HPC-UGent Tier-2 cluster, ordered based on software version (new to old).

To start using KMC, load one of these modules using a `module load` command like:

```shell
module load KMC/3.2.4-GCC-13.3.0
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|KMC/3.2.4-GCC-13.3.0|x|x|x|x|x|x|x|
24 changes: 24 additions & 0 deletions mkdocs/docs/HPC/only/gent/available_software/detail/KerasTuner.md
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KerasTuner
==========

# Available modules


The overview below shows which KerasTuner installations are available per HPC-UGent Tier-2 cluster, ordered based on software version (new to old).

To start using KerasTuner, load one of these modules using a `module load` command like:

```shell
module load KerasTuner/1.4.7-foss-2023a
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|KerasTuner/1.4.7-foss-2023a|x|x|x|x|x|x|x|
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/KronaTools.md
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Expand Up @@ -14,11 +14,12 @@ The overview below shows which KronaTools installations are available per HPC-UG
To start using KronaTools, load one of these modules using a `module load` command like:

```shell
module load KronaTools/2.8.1-GCCcore-12.3.0
module load KronaTools/2.8.1-GCCcore-13.2.0
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|KronaTools/2.8.1-GCCcore-13.2.0|x|x|x|x|x|x|x|
|KronaTools/2.8.1-GCCcore-12.3.0|-|x|x|x|x|x|x|
24 changes: 24 additions & 0 deletions mkdocs/docs/HPC/only/gent/available_software/detail/Lighter.md
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Lighter
=======

# Available modules


The overview below shows which Lighter installations are available per HPC-UGent Tier-2 cluster, ordered based on software version (new to old).

To start using Lighter, load one of these modules using a `module load` command like:

```shell
module load Lighter/1.1.3-GCC-13.3.0
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|Lighter/1.1.3-GCC-13.3.0|x|x|x|x|x|x|x|
1 change: 1 addition & 0 deletions mkdocs/docs/HPC/only/gent/available_software/detail/Lightning.md
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Expand Up @@ -22,3 +22,4 @@ module load Lightning/2.2.1-foss-2023a-CUDA-12.1.1
| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|Lightning/2.2.1-foss-2023a-CUDA-12.1.1|x|-|x|-|x|x|-|
|Lightning/2.2.1-foss-2023a|x|x|x|x|x|x|x|
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/MAFFT.md
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Expand Up @@ -14,11 +14,12 @@ The overview below shows which MAFFT installations are available per HPC-UGent T
To start using MAFFT, load one of these modules using a `module load` command like:

```shell
module load MAFFT/7.520-GCC-12.3.0-with-extensions
module load MAFFT/7.526-GCC-13.3.0-with-extensions
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|MAFFT/7.526-GCC-13.3.0-with-extensions|x|x|x|x|x|x|x|
|MAFFT/7.520-GCC-12.3.0-with-extensions|x|x|x|x|x|x|x|
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/MEGAHIT.md
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Expand Up @@ -14,11 +14,12 @@ The overview below shows which MEGAHIT installations are available per HPC-UGent
To start using MEGAHIT, load one of these modules using a `module load` command like:

```shell
module load MEGAHIT/1.2.9-GCCcore-12.3.0
module load MEGAHIT/1.2.9-GCCcore-13.3.0
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|MEGAHIT/1.2.9-GCCcore-13.3.0|x|x|x|x|x|x|x|
|MEGAHIT/1.2.9-GCCcore-12.3.0|-|x|x|x|x|-|-|
2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/MMseqs2.md
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Expand Up @@ -21,4 +21,4 @@ module load MMseqs2/14-7e284-gompi-2023a

| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|MMseqs2/14-7e284-gompi-2023a|-|x|x|x|x|x|x|
|MMseqs2/14-7e284-gompi-2023a|x|x|x|x|x|x|x|
2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/MUSCLE.md
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Expand Up @@ -21,4 +21,4 @@ module load MUSCLE/5.1.0-GCCcore-12.3.0

| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|MUSCLE/5.1.0-GCCcore-12.3.0|-|x|x|x|x|-|-|
|MUSCLE/5.1.0-GCCcore-12.3.0|x|x|x|x|x|x|x|
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/Mash.md
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Expand Up @@ -14,11 +14,12 @@ The overview below shows which Mash installations are available per HPC-UGent Ti
To start using Mash, load one of these modules using a `module load` command like:

```shell
module load Mash/2.3-GCC-12.3.0
module load Mash/2.3-GCC-13.3.0
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|Mash/2.3-GCC-13.3.0|x|x|x|x|x|x|x|
|Mash/2.3-GCC-12.3.0|-|x|x|x|x|x|x|
24 changes: 24 additions & 0 deletions mkdocs/docs/HPC/only/gent/available_software/detail/Maven.md
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Maven
=====

# Available modules


The overview below shows which Maven installations are available per HPC-UGent Tier-2 cluster, ordered based on software version (new to old).

To start using Maven, load one of these modules using a `module load` command like:

```shell
module load Maven/3.9.7
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|Maven/3.9.7|x|x|x|x|x|x|x|
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