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May 22, 2025
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Auto Update Modules [22 May 2025, 15:43] #941

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2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/data/json_data.json
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2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/data/json_data_detail.json
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2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/ACTC.md
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Expand Up @@ -21,4 +21,4 @@ module load ACTC/1.1-GCCcore-12.3.0

| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|ACTC/1.1-GCCcore-12.3.0|-|-|x|-|x|-|-|
|ACTC/1.1-GCCcore-12.3.0|x|x|x|x|x|x|x|
1 change: 1 addition & 0 deletions mkdocs/docs/HPC/only/gent/available_software/detail/AlphaPulldown.md
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Expand Up @@ -22,3 +22,4 @@ module load AlphaPulldown/2.0.3-foss-2023a-CUDA-12.1.1
| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|AlphaPulldown/2.0.3-foss-2023a-CUDA-12.1.1|x|-|x|-|x|x|-|
|AlphaPulldown/2.0.3-foss-2023a|x|x|x|x|x|x|x|
2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/Clang.md
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Expand Up @@ -21,7 +21,7 @@ module load Clang/18.1.8-GCCcore-13.3.0

| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|Clang/18.1.8-GCCcore-13.3.0|x|-|x|x|x|x|x|
|Clang/18.1.8-GCCcore-13.3.0|x|x|x|x|x|x|x|
|Clang/17.0.6-GCCcore-13.2.0|x|x|x|x|x|x|x|
|Clang/17.0.0_20230515-GCCcore-12.3.0-CUDA-12.1.1|x|-|x|-|x|x|-|
|Clang/16.0.6-GCCcore-12.3.0|x|x|x|x|x|x|x|
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3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/DendroPy.md
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Expand Up @@ -14,13 +14,14 @@ The overview below shows which DendroPy installations are available per HPC-UGen
To start using DendroPy, load one of these modules using a `module load` command like:

```shell
module load DendroPy/4.6.1-GCCcore-12.3.0
module load DendroPy/5.0.1-GCCcore-13.2.0
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|DendroPy/5.0.1-GCCcore-13.2.0|-|x|-|-|-|-|-|
|DendroPy/4.6.1-GCCcore-12.3.0|x|x|x|x|x|x|x|
|DendroPy/4.5.2-GCCcore-12.3.0-Python-2.7.18|x|x|x|-|x|x|x|
|DendroPy/4.5.2-GCCcore-11.3.0|-|-|-|-|-|x|x|
2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/FLTK.md
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Expand Up @@ -22,4 +22,4 @@ module load FLTK/1.3.9-GCCcore-13.2.0
| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|FLTK/1.3.9-GCCcore-13.2.0|-|x|x|x|x|x|x|
|FLTK/1.3.8-GCCcore-12.3.0|-|-|x|-|x|-|-|
|FLTK/1.3.8-GCCcore-12.3.0|x|x|x|x|x|x|x|
1 change: 1 addition & 0 deletions mkdocs/docs/HPC/only/gent/available_software/detail/Java.md
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Expand Up @@ -29,5 +29,6 @@ module load Java/21.0.5
|Java/17(@Java/17.0.6)|x|x|x|x|x|x|x|
|Java/13.0.2|-|-|x|-|x|-|-|
|Java/13(@Java/13.0.2)|-|-|x|-|x|-|-|
|Java/11.0.27|x|x|x|x|x|x|x|
|Java/11.0.20|x|x|x|x|x|x|x|
|Java/11(@Java/11.0.20)|x|x|x|x|x|x|x|
1 change: 1 addition & 0 deletions mkdocs/docs/HPC/only/gent/available_software/detail/MAFFT.md
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Expand Up @@ -22,4 +22,5 @@ module load MAFFT/7.526-GCC-13.3.0-with-extensions
| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|MAFFT/7.526-GCC-13.3.0-with-extensions|x|x|x|x|x|x|x|
|MAFFT/7.526-GCC-13.2.0-with-extensions|-|x|-|-|-|-|-|
|MAFFT/7.520-GCC-12.3.0-with-extensions|x|x|x|x|x|x|x|
2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/POV-Ray.md
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Expand Up @@ -21,4 +21,4 @@ module load POV-Ray/3.7.0.10-GCC-12.3.0

| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|POV-Ray/3.7.0.10-GCC-12.3.0|-|-|x|-|x|-|-|
|POV-Ray/3.7.0.10-GCC-12.3.0|x|x|x|x|x|x|x|
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/Parsl.md
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Expand Up @@ -14,11 +14,12 @@ The overview below shows which Parsl installations are available per HPC-UGent T
To start using Parsl, load one of these modules using a `module load` command like:

```shell
module load Parsl/2024.4.22-GCCcore-12.3.0
module load Parsl/2024.4.22-GCCcore-13.2.0
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|Parsl/2024.4.22-GCCcore-13.2.0|-|x|-|-|-|-|-|
|Parsl/2024.4.22-GCCcore-12.3.0|x|x|x|x|x|x|x|
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/QIIME2.md
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Expand Up @@ -14,11 +14,12 @@ The overview below shows which QIIME2 installations are available per HPC-UGent
To start using QIIME2, load one of these modules using a `module load` command like:

```shell
module load QIIME2/2024.10.1-foss-2023a-amplicon
module load QIIME2/2024.10.1-foss-2023b-amplicon
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|QIIME2/2024.10.1-foss-2023b-amplicon|-|x|-|-|-|-|-|
|QIIME2/2024.10.1-foss-2023a-amplicon|x|x|x|x|x|x|x|
1 change: 1 addition & 0 deletions mkdocs/docs/HPC/only/gent/available_software/detail/Uni-Core.md
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Expand Up @@ -22,3 +22,4 @@ module load Uni-Core/0.0.3-foss-2023a-CUDA-12.1.1
| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|Uni-Core/0.0.3-foss-2023a-CUDA-12.1.1|x|-|x|-|x|x|-|
|Uni-Core/0.0.3-foss-2023a|x|x|x|x|x|x|x|
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/UniFrac.md
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Expand Up @@ -14,11 +14,12 @@ The overview below shows which UniFrac installations are available per HPC-UGent
To start using UniFrac, load one of these modules using a `module load` command like:

```shell
module load UniFrac/1.4-foss-2023a
module load UniFrac/1.4-foss-2023b
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|UniFrac/1.4-foss-2023b|-|x|-|-|-|-|-|
|UniFrac/1.4-foss-2023a|x|x|x|x|x|x|x|
2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/VMD.md
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Expand Up @@ -21,4 +21,4 @@ module load VMD/1.9.4a57-foss-2023a

| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|VMD/1.9.4a57-foss-2023a|-|-|x|-|x|-|-|
|VMD/1.9.4a57-foss-2023a|x|x|x|x|x|x|x|
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/VSEARCH.md
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Expand Up @@ -14,11 +14,12 @@ The overview below shows which VSEARCH installations are available per HPC-UGent
To start using VSEARCH, load one of these modules using a `module load` command like:

```shell
module load VSEARCH/2.25.0-GCC-12.3.0
module load VSEARCH/2.30.0-GCC-13.2.0
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|VSEARCH/2.30.0-GCC-13.2.0|-|x|-|-|-|-|-|
|VSEARCH/2.25.0-GCC-12.3.0|x|x|x|x|x|x|x|
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/alsa-lib.md
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Expand Up @@ -14,12 +14,13 @@ The overview below shows which alsa-lib installations are available per HPC-UGen
To start using alsa-lib, load one of these modules using a `module load` command like:

```shell
module load alsa-lib/1.2.9-GCCcore-12.3.0
module load alsa-lib/1.2.11-GCCcore-13.2.0
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|alsa-lib/1.2.11-GCCcore-13.2.0|-|x|-|-|-|-|-|
|alsa-lib/1.2.9-GCCcore-12.3.0|x|x|x|x|x|x|x|
|alsa-lib/1.2.8-GCCcore-11.3.0|-|-|-|-|-|x|x|
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/attr.md
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Expand Up @@ -14,11 +14,12 @@ The overview below shows which attr installations are available per HPC-UGent Ti
To start using attr, load one of these modules using a `module load` command like:

```shell
module load attr/2.5.1-GCCcore-12.3.0
module load attr/2.5.2-GCCcore-13.2.0
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|attr/2.5.2-GCCcore-13.2.0|-|x|-|-|-|-|-|
|attr/2.5.1-GCCcore-12.3.0|x|x|x|x|x|x|x|
24 changes: 24 additions & 0 deletions mkdocs/docs/HPC/only/gent/available_software/detail/cramjam.md
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@@ -0,0 +1,24 @@
---
hide:
- toc
---

cramjam
=======

# Available modules


The overview below shows which cramjam installations are available per HPC-UGent Tier-2 cluster, ordered based on software version (new to old).

To start using cramjam, load one of these modules using a `module load` command like:

```shell
module load cramjam/2.9.0-GCCcore-12.3.0
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|cramjam/2.9.0-GCCcore-12.3.0|x|x|x|x|x|x|x|
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/cutadapt.md
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Expand Up @@ -14,12 +14,13 @@ The overview below shows which cutadapt installations are available per HPC-UGen
To start using cutadapt, load one of these modules using a `module load` command like:

```shell
module load cutadapt/4.9-GCCcore-12.3.0
module load cutadapt/5.0-GCCcore-13.2.0
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|cutadapt/5.0-GCCcore-13.2.0|-|x|-|-|-|-|-|
|cutadapt/4.9-GCCcore-12.3.0|x|x|x|x|x|x|x|
|cutadapt/1.18-GCCcore-12.3.0-Python-2.7.18|x|x|x|-|x|x|x|
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/gffutils.md
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Expand Up @@ -14,11 +14,12 @@ The overview below shows which gffutils installations are available per HPC-UGen
To start using gffutils, load one of these modules using a `module load` command like:

```shell
module load gffutils/0.13-foss-2023a
module load gffutils/0.13-foss-2023b
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|gffutils/0.13-foss-2023b|-|x|-|-|-|-|-|
|gffutils/0.13-foss-2023a|x|x|x|x|x|x|x|
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/nose3.md
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Expand Up @@ -14,11 +14,12 @@ The overview below shows which nose3 installations are available per HPC-UGent T
To start using nose3, load one of these modules using a `module load` command like:

```shell
module load nose3/1.3.8-GCCcore-12.3.0
module load nose3/1.3.8-GCCcore-13.2.0
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|nose3/1.3.8-GCCcore-13.2.0|-|x|-|-|-|-|-|
|nose3/1.3.8-GCCcore-12.3.0|x|x|x|x|x|x|x|
1 change: 1 addition & 0 deletions mkdocs/docs/HPC/only/gent/available_software/detail/pigz.md
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Expand Up @@ -22,4 +22,5 @@ module load pigz/2.8-GCCcore-13.3.0
| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|pigz/2.8-GCCcore-13.3.0|x|x|x|x|x|x|x|
|pigz/2.8-GCCcore-13.2.0|-|x|-|-|-|-|-|
|pigz/2.8-GCCcore-12.3.0|x|x|x|x|x|x|x|
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/scikit-bio.md
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Expand Up @@ -14,12 +14,13 @@ The overview below shows which scikit-bio installations are available per HPC-UG
To start using scikit-bio, load one of these modules using a `module load` command like:

```shell
module load scikit-bio/0.6.0-foss-2023a
module load scikit-bio/0.6.2-foss-2023b
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|scikit-bio/0.6.2-foss-2023b|-|x|-|-|-|-|-|
|scikit-bio/0.6.0-foss-2023a|x|x|x|x|x|x|x|
|scikit-bio/0.5.9-foss-2023a|-|-|-|-|-|x|x|
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/umap-learn.md
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Expand Up @@ -14,11 +14,12 @@ The overview below shows which umap-learn installations are available per HPC-UG
To start using umap-learn, load one of these modules using a `module load` command like:

```shell
module load umap-learn/0.5.5-foss-2023a
module load umap-learn/0.5.7-foss-2023b
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|umap-learn/0.5.7-foss-2023b|-|x|-|-|-|-|-|
|umap-learn/0.5.5-foss-2023a|x|x|x|x|x|x|x|
2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/xprop.md
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Expand Up @@ -22,4 +22,4 @@ module load xprop/1.2.7-GCCcore-13.2.0
| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|xprop/1.2.7-GCCcore-13.2.0|-|x|x|x|x|x|x|
|xprop/1.2.6-GCCcore-12.3.0|-|-|x|-|x|-|-|
|xprop/1.2.6-GCCcore-12.3.0|x|x|x|x|x|x|x|
24 changes: 24 additions & 0 deletions mkdocs/docs/HPC/only/gent/available_software/detail/yacrd.md
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---
hide:
- toc
---

yacrd
=====

# Available modules


The overview below shows which yacrd installations are available per HPC-UGent Tier-2 cluster, ordered based on software version (new to old).

To start using yacrd, load one of these modules using a `module load` command like:

```shell
module load yacrd/1.0.0-foss-2023a
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|yacrd/1.0.0-foss-2023a|x|x|x|x|x|x|x|
2 changes: 1 addition & 1 deletion mkdocs/extra/gent.yml
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Expand Up @@ -16,7 +16,7 @@ hpcname: hpcugent
loginnode: login.hpc.ugent.be
loginhost: gligar09.gastly.os
altloginhost: gligar10.gastly.os
modules_last_updated: Wed, 21 May 2025 at 15:45:44 CEST # This line is automatically updated by scripts/available_modules/available_modules.py
modules_last_updated: Thu, 22 May 2025 at 15:45:44 CEST # This line is automatically updated by scripts/available_modules/available_modules.py
# get these with ssh-keyscan gligar01.ugent.be > file
# ssh-keygen -l -f file
# ssh-keygen -l -f file -E md5
Expand Down