Skip to content

Auto Update Modules [5 July 2025, 15:43] #965

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Merged
merged 1 commit into from
Jul 5, 2025
Merged

Auto Update Modules [5 July 2025, 15:43] #965

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
1 commit
Select commit
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/data/json_data.json
View file
Open in desktop

Large diffs are not rendered by default.

2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/data/json_data_detail.json
View file
Open in desktop

Large diffs are not rendered by default.

3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/ArchR.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -14,12 +14,13 @@ The overview below shows which ArchR installations are available per HPC-UGent T
To start using ArchR, load one of these modules using a `module load` command like:

```shell
module load ArchR/1.0.2-foss-2023a-R-4.3.2
module load ArchR/1.0.3-foss-2023b-R-4.4.1
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|ArchR/1.0.3-foss-2023b-R-4.4.1|x|-|x|x|x|x|x|
|ArchR/1.0.2-foss-2023a-R-4.3.2|-|x|-|x|-|x|x|
|ArchR/1.0.2-20220704-foss-2023a-R-4.3.2|-|-|-|-|-|x|x|
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/MACS2.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -14,11 +14,12 @@ The overview below shows which MACS2 installations are available per HPC-UGent T
To start using MACS2, load one of these modules using a `module load` command like:

```shell
module load MACS2/2.2.9.1-foss-2023a
module load MACS2/2.2.9.1-foss-2023b
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|MACS2/2.2.9.1-foss-2023b|x|-|x|x|x|x|x|
|MACS2/2.2.9.1-foss-2023a|x|x|x|x|x|x|x|
24 changes: 24 additions & 0 deletions mkdocs/docs/HPC/only/gent/available_software/detail/Mono.md
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -0,0 +1,24 @@
---
hide:
- toc
---

Mono
====

# Available modules


The overview below shows which Mono installations are available per HPC-UGent Tier-2 cluster, ordered based on software version (new to old).

To start using Mono, load one of these modules using a `module load` command like:

```shell
module load Mono/6.12.0.199-GCCcore-13.3.0
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|Mono/6.12.0.199-GCCcore-13.3.0|x|-|x|x|x|x|x|
24 changes: 24 additions & 0 deletions mkdocs/docs/HPC/only/gent/available_software/detail/PeptideShaker.md
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -0,0 +1,24 @@
---
hide:
- toc
---

PeptideShaker
=============

# Available modules


The overview below shows which PeptideShaker installations are available per HPC-UGent Tier-2 cluster, ordered based on software version (new to old).

To start using PeptideShaker, load one of these modules using a `module load` command like:

```shell
module load PeptideShaker/3.0.11-Java-11
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|PeptideShaker/3.0.11-Java-11|x|x|x|x|x|x|x|
24 changes: 24 additions & 0 deletions mkdocs/docs/HPC/only/gent/available_software/detail/SearchGUI.md
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -0,0 +1,24 @@
---
hide:
- toc
---

SearchGUI
=========

# Available modules


The overview below shows which SearchGUI installations are available per HPC-UGent Tier-2 cluster, ordered based on software version (new to old).

To start using SearchGUI, load one of these modules using a `module load` command like:

```shell
module load SearchGUI/4.3.9-GCCcore-13.3.0-Java-11
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|SearchGUI/4.3.9-GCCcore-13.3.0-Java-11|x|-|x|x|x|x|x|
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/chromVARmotifs.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -14,11 +14,12 @@ The overview below shows which chromVARmotifs installations are available per HP
To start using chromVARmotifs, load one of these modules using a `module load` command like:

```shell
module load chromVARmotifs/0.2.0-foss-2023a-R-4.3.2
module load chromVARmotifs/0.2.0-foss-2023b-R-4.4.1
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|chromVARmotifs/0.2.0-foss-2023b-R-4.4.1|x|-|x|x|x|x|x|
|chromVARmotifs/0.2.0-foss-2023a-R-4.3.2|x|x|-|x|-|x|x|
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/presto.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -14,11 +14,12 @@ The overview below shows which presto installations are available per HPC-UGent
To start using presto, load one of these modules using a `module load` command like:

```shell
module load presto/1.0.0-20230501-foss-2023a-R-4.3.2
module load presto/1.0.0-20230501-foss-2023b-R-4.4.1
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|presto/1.0.0-20230501-foss-2023b-R-4.4.1|x|-|x|x|x|x|x|
|presto/1.0.0-20230501-foss-2023a-R-4.3.2|-|x|-|x|-|x|x|
2 changes: 1 addition & 1 deletion mkdocs/extra/gent.yml
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -16,7 +16,7 @@ hpcname: hpcugent
loginnode: login.hpc.ugent.be
loginhost: gligar09.gastly.os
altloginhost: gligar10.gastly.os
modules_last_updated: Wed, 02 Jul 2025 at 15:45:44 CEST # This line is automatically updated by scripts/available_modules/available_modules.py
modules_last_updated: Sat, 05 Jul 2025 at 15:45:39 CEST # This line is automatically updated by scripts/available_modules/available_modules.py
# get these with ssh-keyscan gligar01.ugent.be > file
# ssh-keygen -l -f file
# ssh-keygen -l -f file -E md5
Expand Down