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Fix Github actions [wip]#112

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karel-brinda wants to merge 2 commits intomainfrom
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Fix Github actions [wip]#112
karel-brinda wants to merge 2 commits intomainfrom
ci

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@karel-brinda
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closes #111

@karel-brinda
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@leoisl Hi Leandro, do you have any idea why this doesn't work?

@karel-brinda
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It seems that Snakemake somehow requires the conda command, but micromamba doesn't expose it. I don't understand why it used to work and doesn't any more.

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leoisl commented Apr 2, 2025

I think previous colleagues at EBI are getting similar errors with snakemake workflows... I don't know exactly why it is happening

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CI no longer works due to missing conda via micromamba

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