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src/evaluation/figure_notebooks/figure_1/1c_make_counts_scatter_plots_uncorrected.ipynb

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src/evaluation/figure_notebooks/figure_1/1d_make_jsd_plots_uncorrected.ipynb

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src/evaluation/figure_notebooks/figure_1/2_make_counts_scatter_plots_bias.ipynb

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src/evaluation/figure_notebooks/figure_1/2_make_counts_scatter_plots_bias_peaks.ipynb

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src/evaluation/figure_notebooks/figure_1/Untitled1.ipynb

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src/evaluation/figure_notebooks/figure_1/bpnet_chrombpnet_compare.ipynb

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src/evaluation/figure_notebooks/figure_1/configs/config_main_locus_2.tsv

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ATAC observed /oak/stanford/groups/akundaje/projects/chromatin-atlas-2022/chrombpnet/merged/K562/ATAC_temp/K562_unstranded_scaled.bw FALSE None None single None None None 800000
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Predicted /mnt/lab_data3/anusri/chrombpnet/results/chrombpnet/ATAC_PE/K562/uncorrected_model_08.22.2022_filters_512_dil_8/K562_w_bias.bw TRUE None None single None None 1.44070548533405 800000
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Counts importance /mnt/lab_data3/anusri/chrombpnet/results/chrombpnet/ATAC_PE/K562/uncorrected_model_08.22.2022_filters_512_dil_8/merged.K562.counts.bw TRUE None None single -0.008637 0.056777 0.056777 2c5b4b
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Profile importance /mnt/lab_data3/anusri/chrombpnet/results/chrombpnet/ATAC_PE/K562/uncorrected_model_08.22.2022_filters_512_dil_8/merged.K562.profile.bw TRUE None None single -0.006682 0.064410 0.064410 2c5b4b
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Profile importance /mnt/lab_data3/anusri/chrombpnet/results/chrombpnet/ATAC_PE/K562/uncorrected_model_08.22.2022_filters_512_dil_8/merged.K562.profile.bw TRUE None None single -0.006682 0.064410 0.064410 2c5b4b
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spi1chip /mnt/lab_data2/anusri/chrombpnet/src/evaluation/figure_notebooks/figure_1/bedtracks/ctcfbed/ENCFF088XXV.bigBed TRUE None None bigbed -0.006682 0.064410 0.064410 2c5b4b
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src/evaluation/figure_notebooks/figure_1/locus_plots.ipynb

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