R scripts used in Publications

Leonard Blaschek

Listed are all scripts that I used to create figures in papers and manuscripts. All scripts are independent of each other. For the used data files, see the respective supplementary files on the journal page. Subfigures that are not listed were done outside of R or by co-authors. Do not hesitate to contact me if something is unclear or missing.

Blaschek et al., manuscript

All figures and supplementals

2021_lac_paper.rmd

Blaschek & Pesquet, Front. Plant Sci. 2021 (10.3389/fpls.2021.754601)

All figures and supplementals

2021_phenoloxidase_review.rmd

Ménard & Blaschek et al., biorXiv 2021 (10.1101/2021.06.12.447240)

All figures and supplementals

irx_pub_figs.rmd

Blaschek et al., ACS Sustain. Chem. Eng. 2020 (10.1021/acssuschemeng.0c00194)

All figures and supplementals

raman_pubfigs_model.rmd

Blaschek et al., Front. Plant Sci. 2020 (10.3389/fpls.2020.00109)

Figure 1

D spectra_peaks.R

Figure 2

B spectra_DHPs.R

Figure 3

B, S4 fig4.R

Figure 4

A pyro_corr.R
B RAMAN_spec_corr.R

Figure 5

C, S7 genotypes_grid.R
D clustering_phlog_absorbance.R
E PCA_wiesner.R

Figure 6

B, S9 poplar_distance.R
C clustering_poplar.R
D PCA_poplar.R

Figure 7

A, B cml_wiesner.rmd

Figure 8

A, B, S10, S11 FW_reworked.R

Figure S5

GCHO_content.R