Use conda version of libsemigroups in the CI
#769
Workflow file for this run
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: Run tests and lint | |
| on: [pull_request, workflow_dispatch] | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| conda-version: | |
| name: "Conda, ${{ matrix.os }}, Python ${{ matrix.python_version }}" | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python_version: ["3.9", "3.10", "3.11", "3.12", "3.13"] | |
| os: ["ubuntu-latest", "macOS-latest"] | |
| include: | |
| - os: "ubuntu-latest" | |
| compiler: "ccache g++" | |
| - os: "macOS-latest" | |
| compiler: "ccache clang++" | |
| runs-on: ${{ matrix.os }} | |
| timeout-minutes: 15 | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: "Setup ccache . . ." | |
| uses: Chocobo1/setup-ccache-action@v1 | |
| with: | |
| update_packager_index: false | |
| install_ccache: true | |
| # We could remove this step and instead install Python with micromamba. | |
| # This would mean we could avoid specifying LD_LIBRARY_PATH and LDFLAGS. | |
| # However, JDE thinks the current setup better reflects how a developer | |
| # might wish to install the package, so we have opted for this. | |
| - name: "Setup Python . . ." | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python_version }} | |
| cache: "pip" | |
| - name: "Create micromamba environment . . ." | |
| uses: mamba-org/setup-micromamba@v1 | |
| with: | |
| environment-name: libsemigroups | |
| create-args: >- | |
| libsemigroups | |
| - name: "Set environment variables . . ." | |
| run: | | |
| echo "PKG_CONFIG_PATH=$MAMBA_ROOT_PREFIX/envs/libsemigroups/lib/pkgconfig:$MAMBA_ROOT_PREFIX/envs/libsemigroups/share/pkgconfig:/usr/local/lib/pkgconfig" >> $GITHUB_ENV | |
| echo "LD_LIBRARY_PATH=$MAMBA_ROOT_PREFIX/envs/libsemigroups/lib:/usr/local/lib" >> $GITHUB_ENV | |
| echo "LDFLAGS=-Wl,-rpath,$MAMBA_ROOT_PREFIX/envs/libsemigroups/lib" >> $GITHUB_ENV | |
| echo "PATH=$MAMBA_ROOT_PREFIX/envs/libsemigroups/bin:$PATH" >> $GITHUB_ENV | |
| - name: "Check Python version . . ." | |
| run: | | |
| python --version | |
| pip --version | |
| - name: "Install requirements . . ." | |
| run: pip install -r requirements.txt | |
| - name: "Pip install libsemigroups_pybind11 . . ." | |
| run: | | |
| CXX="${{ matrix.compiler }}" pip install . -v | |
| - name: "Run tests . . ." | |
| run: | | |
| python -m pytest -vv tests/test_*.py | |
| - name: "Run doc tests . . ." | |
| run: | | |
| etc/make-doc.sh # so that all files are generated! | |
| cd docs | |
| python -m sphinx -b doctest -d _build/doctrees source _build/doctest | |
| - name: "Pip install pylint + cpplint . . ." | |
| run: | | |
| pip3 install pylint cpplint | |
| - name: "Run pylint and cpplint . . ." | |
| run: | | |
| python -m pylint setup.py tests/*.py libsemigroups_pybind11/*.py | |
| python -m cpplint src/*.hpp src/*.cpp | |
| main-branch: | |
| name: "Main, ${{ matrix.os }}, Python 3.13" | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: ["ubuntu-latest", "macOS-latest"] | |
| include: | |
| - os: "ubuntu-latest" | |
| compiler: "ccache g++" | |
| - os: "macOS-latest" | |
| compiler: "ccache clang++" | |
| runs-on: ${{ matrix.os }} | |
| timeout-minutes: 15 | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: "Setup ccache . . ." | |
| uses: Chocobo1/setup-ccache-action@v1 | |
| with: | |
| update_packager_index: false | |
| install_ccache: true | |
| # We could remove this step and instead install Python with micromamba. | |
| # This would mean we could avoid specifying LD_LIBRARY_PATH and LDFLAGS. | |
| # However, JDE thinks the current setup better reflects how a developer | |
| # might wish to install the package, so we have opted for this. | |
| - name: "Setup Python . . ." | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: 3.13 | |
| cache: "pip" | |
| - name: "Create micromamba environment . . ." | |
| uses: mamba-org/setup-micromamba@v1 | |
| with: | |
| environment-name: libsemigroups | |
| create-args: >- | |
| fmt | |
| - name: "Set environment variables . . ." | |
| run: | | |
| echo "PKG_CONFIG_PATH=$MAMBA_ROOT_PREFIX/envs/libsemigroups/lib/pkgconfig:$MAMBA_ROOT_PREFIX/envs/libsemigroups/share/pkgconfig:/usr/local/lib/pkgconfig" >> $GITHUB_ENV | |
| echo "LD_LIBRARY_PATH=$MAMBA_ROOT_PREFIX/envs/libsemigroups/lib:/usr/local/lib" >> $GITHUB_ENV | |
| echo "LDFLAGS=-Wl,-rpath,$MAMBA_ROOT_PREFIX/envs/libsemigroups/lib" >> $GITHUB_ENV | |
| echo "PATH=$MAMBA_ROOT_PREFIX/envs/libsemigroups/bin:$PATH" >> $GITHUB_ENV | |
| - name: "Check Python version . . ." | |
| run: | | |
| python --version | |
| pip --version | |
| - name: "Install make requirements . . ." | |
| if: ${{ matrix.os == 'macOS-latest' }} | |
| run: brew install autoconf automake libtool | |
| - name: "Install requirements libsemigroups . . ." | |
| run: pip install -r requirements.txt | |
| - name: "Install libsemigroups . . ." | |
| run: | | |
| git clone --depth 1 --branch main https://github.com/libsemigroups/libsemigroups.git | |
| cd libsemigroups | |
| ./autogen.sh | |
| ./configure CXX="${{ matrix.compiler }}" CXXFLAGS="-O2 -g" --disable-hpcombi --with-external-fmt | |
| sudo make install -j8 | |
| ccache -s | |
| - name: "Pip install libsemigroups_pybind11 . . ." | |
| run: | | |
| CXX="${{ matrix.compiler }}" pip install . -v | |
| - name: "Run tests . . ." | |
| run: | | |
| python -m pytest -vv tests/test_*.py | |
| - name: "Run doc tests . . ." | |
| run: | | |
| etc/make-doc.sh # so that all files are generated! | |
| cd docs | |
| python -m sphinx -b doctest -d _build/doctrees source _build/doctest | |
| - name: "Pip install pylint + cpplint . . ." | |
| run: | | |
| pip install pylint cpplint | |
| - name: "Run pylint and cpplint . . ." | |
| run: | | |
| python -m pylint setup.py tests/*.py libsemigroups_pybind11/*.py | |
| python -m cpplint src/*.hpp src/*.cpp |