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22 changes: 12 additions & 10 deletions mappings.yml
Original file line number Diff line number Diff line change
@@ -1,14 +1,16 @@
registry_id: mapping-registry-id
registry_title: Mapping Registry Template
registry_description: This is a template for a mapping registry, use to jumpstart your own.
homepage: https://github.com/mapping-commons/mapping-commons-template
registry_id: http://w3id.org/sssom/commons/mesh-mappings
registry_title: OBO Ontology to MeSH Mappings
registry_description: Mapping anatomical and sub-cellular entity OBO Ontology
terms to Medical Subject Headings (MeSH) Concept terms.
homepage: https://github.com/mapping-commons/mesh-mappings
mappings:
- mapping_set_id: mp_hp_example
mapping_set_group: example_mappings
mapping_set_title: "Example Ontology Mappings: MP-HP"
- mapping_set_id: https://github.com/mapping-commons/mesh-mappings/blob/main/mappings/obo-mesh_embedded.sssom.tsv
mapping_set_title: "CL, GO, Uberon, OBA to MeSH"
curie_map:
HP: "http://purl.obolibrary.org/obo/HP_"
MP: "http://purl.obolibrary.org/obo/MP_"
CL: "http://purl.obolibrary.org/obo/cl_"
UBERON: "http://purl.obolibrary.org/obo/uberon_"
GO: "http://purl.obolibrary.org/obo/go_"
OBA: "http://purl.obolibrary.org/obo/oba_"
skos: "http://www.w3.org/2004/02/skos/core"
license: "https://creativecommons.org/publicdomain/zero/1.0/"
mapping_provider: "https://github.com/mapping-commons/mapping-commons-template/"
mapping_provider: "https://github.com/mapping-commons/mesh-mappings/"
1,672 changes: 0 additions & 1,672 deletions mappings/mp_hp_example.sssom.tsv

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11 changes: 0 additions & 11 deletions mappings/mp_hp_example.sssom.yml

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1,683 changes: 0 additions & 1,683 deletions mappings/mp_hp_example_embedded.sssom.tsv

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1,116 changes: 1,116 additions & 0 deletions mappings/obo-mesh.sssom.tsv

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17 changes: 17 additions & 0 deletions mappings/obo-mesh.sssom.yml
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curie_map:
MESH: http://id.nlm.nih.gov/mesh/
CL: http://purl.obolibrary.org/obo/CL_
UBERON: http://purl.obolibrary.org/obo/UBERON_
GO: http://purl.obolibrary.org/obo/GO_
OBA: http://purl.obolibrary.org/obo/OBA_
skos: http://www.w3.org/2004/02/skos/core
license: https://creativecommons.org/publicdomain/zero/1.0/
mapping_provider: https://www.ebi.ac.uk
mapping_set_group: obo_mesh_mappings
mapping_set_id: obo_mesh

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#2

mapping_set_title: 'OBO Ontology Mappings to MeSH'
object_source: https://nlmpubs.nlm.nih.gov/projects/mesh/rdf/mesh.nt.gz
subject_source: http://purl.obolibrary.org/obo/cl.owl
subject_source: http://purl.obolibrary.org/obo/uberon.owl
subject_source: http://purl.obolibrary.org/obo/go.owl
subject_source: http://purl.obolibrary.org/obo/oba.owl
1,133 changes: 1,133 additions & 0 deletions mappings/obo-mesh_embedded.sssom.tsv

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