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Merged
tschaume merged 1 commit into from
Oct 7, 2025
Merged

Automated dependency upgrades #1012

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22 changes: 12 additions & 10 deletions requirements/requirements-ubuntu-latest_py3.11.txt
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Original file line number Diff line number Diff line change
Expand Up @@ -2,27 +2,29 @@
# This file is autogenerated by pip-compile with Python 3.11
# by the following command:
#
# pip-compile --cert=None --client-cert=None --index-url=None --output-file=requirements/requirements-ubuntu-latest_py3.11.txt --pip-args=None pyproject.toml
# pip-compile --output-file=requirements/requirements-ubuntu-latest_py3.11.txt pyproject.toml
#
annotated-types==0.7.0
# via pydantic
bibtexparser==1.4.3
# via pymatgen
boto3==1.40.43
blake3==1.0.7
# via emmet-core
boto3==1.40.47
# via mp-api (pyproject.toml)
botocore==1.40.43
botocore==1.40.47
# via
# boto3
# s3transfer
certifi==2025.8.3
certifi==2025.10.5
# via requests
charset-normalizer==3.4.3
# via requests
contourpy==1.3.3
# via matplotlib
cycler==0.12.1
# via matplotlib
emmet-core==0.84.10
emmet-core==0.85.0
# via mp-api (pyproject.toml)
fonttools==4.60.1
# via matplotlib
Expand All @@ -49,7 +51,7 @@ mpmath==1.3.0
# via sympy
msgpack==1.1.1
# via mp-api (pyproject.toml)
narwhals==2.6.0
narwhals==2.7.0
# via plotly
networkx==3.5
# via pymatgen
Expand All @@ -75,22 +77,22 @@ pandas==2.3.3
# via pymatgen
pillow==11.3.0
# via matplotlib
plotly==6.3.0
plotly==6.3.1
# via pymatgen
pybtex==0.25.1
# via emmet-core
pydantic==2.11.9
pydantic==2.12.0
# via
# emmet-core
# pydantic-settings
# pymatgen-io-validation
pydantic-core==2.33.2
pydantic-core==2.41.1
# via pydantic
pydantic-settings==2.11.0
# via
# emmet-core
# pymatgen-io-validation
pymatgen==2025.6.14
pymatgen==2025.10.7
# via
# emmet-core
# mp-api (pyproject.toml)
Expand Down
48 changes: 13 additions & 35 deletions requirements/requirements-ubuntu-latest_py3.11_extras.txt
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Original file line number Diff line number Diff line change
Expand Up @@ -2,7 +2,7 @@
# This file is autogenerated by pip-compile with Python 3.11
# by the following command:
#
# pip-compile --all-extras --cert=None --client-cert=None --index-url=None --output-file=requirements/requirements-ubuntu-latest_py3.11_extras.txt --pip-args=None pyproject.toml
# pip-compile --all-extras --output-file=requirements/requirements-ubuntu-latest_py3.11_extras.txt pyproject.toml
#
alabaster==1.0.0
# via sphinx
Expand All @@ -14,7 +14,7 @@ ase==3.26.0
# via pymatgen-analysis-diffusion
asttokens==3.0.0
# via stack-data
attrs==25.3.0
attrs==25.4.0
# via
# jsonschema
# referencing
Expand All @@ -26,9 +26,9 @@ blake3==1.0.7
# via emmet-core
boltons==25.0.0
# via mpcontribs-client
boto3==1.40.43
boto3==1.40.47
# via mp-api (pyproject.toml)
botocore==1.40.43
botocore==1.40.47
# via
# boto3
# s3transfer
Expand All @@ -38,7 +38,7 @@ bravado-core==6.1.1
# via bravado
cachetools==6.2.0
# via mpcontribs-client
certifi==2025.8.3
certifi==2025.10.5
# via requests
cfgv==3.4.0
# via pre-commit
Expand Down Expand Up @@ -84,7 +84,7 @@ fonttools==4.60.1
# via matplotlib
fqdn==1.5.1
# via jsonschema
identify==2.6.14
identify==2.6.15
# via pre-commit
idna==3.10
# via
Expand Down Expand Up @@ -152,15 +152,6 @@ matplotlib-inline==0.1.7
# via ipython
mccabe==0.7.0
# via flake8
mda-xdrlib==0.2.0
# via mdanalysis
mdanalysis==2.9.0
# via
# emmet-core
# solvation-analysis
# transport-analysis
mmtf-python==1.1.3
# via mdanalysis
monotonic==1.6
# via bravado
monty==2025.3.3
Expand All @@ -183,15 +174,14 @@ msgpack==1.1.1
# via
# bravado
# bravado-core
# mmtf-python
# mp-api (pyproject.toml)
mypy==1.18.2
# via mp-api (pyproject.toml)
mypy-extensions==1.1.0
# via
# mp-api (pyproject.toml)
# mypy
narwhals==2.6.0
narwhals==2.7.0
# via plotly
networkx==3.5
# via
Expand Down Expand Up @@ -229,7 +219,6 @@ packaging==25.0
# via
# lazy-loader
# matplotlib
# mdanalysis
# plotly
# pytest
# scikit-image
Expand All @@ -242,8 +231,6 @@ pandas==2.3.3
# mpcontribs-client
# pymatgen
# seaborn
# solvation-analysis
# statsmodels
parso==0.8.5
# via jedi
pathspec==0.12.1
Expand All @@ -261,7 +248,7 @@ platformdirs==4.4.0
# via
# pint
# virtualenv
plotly==6.3.0
plotly==6.3.1
# via
# mpcontribs-client
# pymatgen
Expand Down Expand Up @@ -291,12 +278,12 @@ pycodestyle==2.14.0
# via
# flake8
# mp-api (pyproject.toml)
pydantic==2.11.9
pydantic==2.12.0
# via
# emmet-core
# pydantic-settings
# pymatgen-io-validation
pydantic-core==2.33.2
pydantic-core==2.41.1
# via pydantic
pydantic-settings==2.11.0
# via
Expand All @@ -312,7 +299,7 @@ pygments==2.19.2
# sphinx
pyisemail==2.0.1
# via mpcontribs-client
pymatgen==2025.6.14
pymatgen==2025.10.7
# via
# emmet-core
# matminer
Expand Down Expand Up @@ -376,8 +363,6 @@ pyyaml==6.0.3
# pre-commit
# pybtex
# swagger-spec-validator
rdkit==2025.3.6
# via solvation-analysis
referencing==0.36.2
# via
# jsonschema
Expand Down Expand Up @@ -484,12 +469,8 @@ sympy==1.14.0
tabulate==0.9.0
# via pymatgen
threadpoolctl==3.6.0
# via
# mdanalysis
# scikit-learn
tidynamics==1.1.2
# via transport-analysis
tifffile==2025.9.30
# via scikit-learn
tifffile==2025.10.4
# via scikit-image
tqdm==4.67.1
# via
Expand Down Expand Up @@ -552,6 +533,3 @@ webcolors==24.11.1
# via jsonschema
wrapt==1.17.3
# via smart-open

# The following packages are considered to be unsafe in a requirements file:
# setuptools
22 changes: 12 additions & 10 deletions requirements/requirements-ubuntu-latest_py3.12.txt
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -2,27 +2,29 @@
# This file is autogenerated by pip-compile with Python 3.12
# by the following command:
#
# pip-compile --cert=None --client-cert=None --index-url=None --output-file=requirements/requirements-ubuntu-latest_py3.12.txt --pip-args=None pyproject.toml
# pip-compile --output-file=requirements/requirements-ubuntu-latest_py3.12.txt pyproject.toml
#
annotated-types==0.7.0
# via pydantic
bibtexparser==1.4.3
# via pymatgen
boto3==1.40.43
blake3==1.0.7
# via emmet-core
boto3==1.40.47
# via mp-api (pyproject.toml)
botocore==1.40.43
botocore==1.40.47
# via
# boto3
# s3transfer
certifi==2025.8.3
certifi==2025.10.5
# via requests
charset-normalizer==3.4.3
# via requests
contourpy==1.3.3
# via matplotlib
cycler==0.12.1
# via matplotlib
emmet-core==0.84.10
emmet-core==0.85.0
# via mp-api (pyproject.toml)
fonttools==4.60.1
# via matplotlib
Expand All @@ -49,7 +51,7 @@ mpmath==1.3.0
# via sympy
msgpack==1.1.1
# via mp-api (pyproject.toml)
narwhals==2.6.0
narwhals==2.7.0
# via plotly
networkx==3.5
# via pymatgen
Expand All @@ -75,22 +77,22 @@ pandas==2.3.3
# via pymatgen
pillow==11.3.0
# via matplotlib
plotly==6.3.0
plotly==6.3.1
# via pymatgen
pybtex==0.25.1
# via emmet-core
pydantic==2.11.9
pydantic==2.12.0
# via
# emmet-core
# pydantic-settings
# pymatgen-io-validation
pydantic-core==2.33.2
pydantic-core==2.41.1
# via pydantic
pydantic-settings==2.11.0
# via
# emmet-core
# pymatgen-io-validation
pymatgen==2025.6.14
pymatgen==2025.10.7
# via
# emmet-core
# mp-api (pyproject.toml)
Expand Down
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