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25 changes: 18 additions & 7 deletions src/pymatgen/electronic_structure/cohp.py
Original file line number Diff line number Diff line change
Expand Up @@ -1405,7 +1405,11 @@ def as_dict(self) -> dict[str, Any]:
{
key: {
"icohp": {str(spin): value for spin, value in val["icohp"].items()},
"orbitals": [[n, int(orb)] for n, orb in val["orbitals"]],
"orbitals": (
[[n, int(orb)] for n, orb in val["orbitals"]]
if isinstance(val["orbitals"][0], (list, tuple))
else list(val["orbitals"]) # Handle LCFO orbitals
),
}
for key, val in entry.items()
}
Expand Down Expand Up @@ -1433,17 +1437,24 @@ def from_dict(cls, dct: dict[str, Any]) -> Self:
for key in lab_orb_icohp[orb]:
sub_dict = {}
if key == "icohp":
sub_dict[key] = {
Spin.up: lab_orb_icohp[orb][key]["1"],
Spin.down: lab_orb_icohp[orb][key]["-1"],
}
if dct.get("is_spin_polarized"):
sub_dict[key] = {
Spin.up: lab_orb_icohp[orb][key]["1"],
Spin.down: lab_orb_icohp[orb][key]["-1"],
}
else:
sub_dict[key] = {Spin.up: lab_orb_icohp[orb][key]["1"]}

if key == "orbitals":
orb_temp = []

for item in lab_orb_icohp[orb][key]:
item[1] = Orbital(item[1])
orb_temp.append(item)
# Handle LCFO orbitals
if isinstance(item, (list, tuple)):
item[1] = Orbital(item[1])
orb_temp.append(tuple(item))
else:
orb_temp.append(item)
sub_dict[key] = orb_temp # type: ignore[assignment]

new_list_orb[bond_num][orb].update(sub_dict)
Expand Down
17 changes: 9 additions & 8 deletions tests/io/lobster/test_outputs.py
Original file line number Diff line number Diff line change
Expand Up @@ -2169,14 +2169,15 @@ def test_values(self):
assert self.icohp_lcfo_non_orbitalwise.icohplist["16"]["icohp"][Spin.down] == approx(-0.29842)

def test_msonable(self):
dict_data = self.icobi_orbitalwise_spinpolarized.as_dict()
icohplist_from_dict = Icohplist.from_dict(dict_data)
all_attributes = vars(self.icobi_orbitalwise_spinpolarized)
for attr_name, attr_value in all_attributes.items():
if isinstance(attr_value, IcohpCollection):
assert getattr(icohplist_from_dict, attr_name).as_dict() == attr_value.as_dict()
else:
assert getattr(icohplist_from_dict, attr_name) == attr_value
for icohplist_obj in [self.icobi_orbitalwise_spinpolarized, self.icohp_nacl_511_nsp]:
dict_data = icohplist_obj.as_dict()
icohplist_from_dict = Icohplist.from_dict(dict_data)
all_attributes = vars(icohplist_obj)
for attr_name, attr_value in all_attributes.items():
if isinstance(attr_value, IcohpCollection):
assert getattr(icohplist_from_dict, attr_name).as_dict() == attr_value.as_dict()
else:
assert getattr(icohplist_from_dict, attr_name) == attr_value

def test_missing_trailing_newline(self):
fname = f"{self.tmp_path}/icohplist"
Expand Down
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