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Deprecated slot argument in WriteH5Group causing failures

Status: Open.

#199 In mojaveazure/seurat-disk;

· YoukaiFromAccounting opened on Feb 6, 2026

after convering in scanpy adata.uns['rank_genes_groups']['names'] contain numbers not gene names

Status: Open.

#196 In mojaveazure/seurat-disk;

· bontix-77 opened on Oct 31, 2025

Error reading h5seurat file

Status: Open.

#195 In mojaveazure/seurat-disk;

· yesitsjess opened on Oct 28, 2025

SeuratDisk Should Be Published on CRAN or Bioconductor

Status: Open.

#194 In mojaveazure/seurat-disk;

· nick-youngblut opened on Oct 17, 2025

LoadH5Seurat warning: "The <code>slot</code> argument of <code>GetAssayData()</code> is deprecated as of SeuratObject 5.0.0"

Status: Open.

#192 In mojaveazure/seurat-disk;

· JG1ANDONLY opened on Jul 22, 2025

Fehler in unlist(): 'recursive' must be a length-1 vector bei Nutzung von SeuratDisk mit Seurat 5

Status: Open.

#191 In mojaveazure/seurat-disk;

· Nutria228 opened on Jul 1, 2025

UMAP Embeddings missing by Default converting SeuratObject to Loom

Status: Open.

#190 In mojaveazure/seurat-disk;

· airabiotenor opened on Jun 27, 2025

GetAssayData() resp. SetAssayData()

Status: Open.

#189 In mojaveazure/seurat-disk;

· Zockimonster opened on Jun 2, 2025

Errors: error #000: ../../src/H5F.c in H5Fopen(): line 620: unable to open file class: HDF5 major: File accessibility minor: Unable to open file

Status: Open.

#188 In mojaveazure/seurat-disk;

· wyj20031116 opened on May 29, 2025

Error in guess_dtype(x = x, ...) : unknown type when saving Seurat object

Status: Open.

#187 In mojaveazure/seurat-disk;

· LeaLe88 opened on May 12, 2025

Convert anndata

Status: Open.

#186 In mojaveazure/seurat-disk;

· Cran73 opened on Jan 8, 2025

Error while using LoadH5Seurat : "Error in sparseMatrix(i = x[["indices"]][] + 1, p = x[["indptr"]][], x = x[["data"]][], : 'p' must be a nondecreasing vector"

Status: Open.

#185 In mojaveazure/seurat-disk;

· ellenbouchard opened on Oct 28, 2024