monarch-app/.github/workflows/test-backend.yaml at main · monarch-initiative/monarch-app · GitHub

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name: Test Backend

on:
  pull_request:
  workflow_dispatch:

env:
  PYTHONPATH: ${{ github.workspace }}/backend
  UV_VERSION: "0.7.x"

defaults:
  run:
    working-directory: ./backend

jobs:
  test-backend:
    runs-on: ${{ matrix.os }}
    strategy:
      matrix:
        python-version: ["3.10", "3.11", "3.12"]
        os: [ubuntu-latest]

    steps:
      - uses: actions/checkout@v4

      - name: Set up Python ${{ matrix.python-version }}
        uses: actions/setup-python@v5
        with:
          python-version: ${{ matrix.python-version }}

      - name: Install uv
        uses: astral-sh/setup-uv@v6
        with:
          enable-cache: true
          version: ${{ env.UV_VERSION }}

      - name: Verify lockfile is up-to-date
        run: |
          uv lock --check

      - name: Install library
        run: |
          uv sync --extra dev

      - name: Run tests
        run: |
          uv run pytest tests
        shell: bash

      - name: Generate coverage report
        run: |
          uv run coverage run -m pytest tests
          uv run coverage xml
          uv run coverage report -m
        shell: bash

      - name: Upload coverage report
        if: github.repository == 'monarch-initiative/monarch-app'
        uses: codecov/codecov-action@v5
        with:
          name: codecov-results-${{ matrix.python-version }}
          token: ${{ secrets.CODECOV_TOKEN }}
          files: coverage.xml
          fail_ci_if_error: true