fix shellcheck and auto fix

.githooks/pre-commit

@@ -230,24 +230,54 @@ pre_commit() {
 run_shellcheck() {
   local file="$1"
   echo "Running shellcheck on $file"
-  if ! shellcheck --color=always -x "$file" -e SC2154 -e SC1091 -e SC1090 -e SC2148 -o require-variable-braces -P "scripts"; then
+
+  # Try to auto-fix issues
+  local diff_output
+  diff_output=$(shellcheck -f diff "$file" -e SC2154 -e SC1091 -e SC1090 -e SC2148 -o require-variable-braces -P "scripts" 2>&1)
+
+  if [[ "$diff_output" == *"Issues were detected, but none were auto-fixable"* ]]; then
     echo -e "${RED}shellcheck failed on $file${NO_COLOR}"
-    exit 1
+    echo "$file" >> "${SHELLCHECK_FAILED_FILE}"
+    return 1
+  elif echo "$diff_output" | git apply --allow-empty; then
+    echo "Applied auto-fixes for $file"
+  else
+    echo -e "${RED}shellcheck failed on $file${NO_COLOR}"
+    echo "$file" >> "${SHELLCHECK_FAILED_FILE}"
+    return 1
   fi
 }
 
 # Export function so it's available in subshells (for xargs)
 export -f run_shellcheck
 
 start_shellcheck() {
+  # Create temporary file to track failed files
+  local failed_file
+  failed_file=$(mktemp)
+  export SHELLCHECK_FAILED_FILE="$failed_file"
+
   # shellcheck disable=SC2016
   {
     find scripts -type f -name "*.sh"
     find scripts/dev/contexts -type f | grep -v private-context
     find scripts/funcs -type f
     find public/architectures -type f -name "*.sh"
     find docs/ -type f -name "*.sh"
-  } | xargs -I {} -P 20 bash -c 'run_shellcheck "$1"' _ {}
+  } | xargs -I {} -P 20 bash -c 'run_shellcheck "$1" || true' _ {}
+
+  # Show summary of failed files
+  if [[ -s "$failed_file" ]]; then
+    echo -e "\n${RED}Shellcheck failed on the following files:${NO_COLOR}"
+    while read -r file; do
+      echo -e "  ${RED}✗${NO_COLOR} $file"
+    done < "$failed_file"
+    echo -e "\n${RED}Total: $(wc -l < "$failed_file") file(s) failed shellcheck${NO_COLOR}"
+    rm -f "$failed_file"
+    exit 1
+  fi
+
+  rm -f "$failed_file"
 }
 
 cmd=${1:-"pre-commit"}

scripts/dev/switch_context.sh

@@ -105,17 +105,17 @@ if [[ -n "${PROJECT_DIR:-}" && -x "${PROJECT_DIR}/bin/kubectl" ]]; then
     KUBECTL_CMD="${PROJECT_DIR}/bin/kubectl"
 fi
 
-if [[ "$KUBECTL_CMD" != "kubectl" ]] || which kubectl > /dev/null; then
+if [[ "${KUBECTL_CMD}" != "kubectl" ]] || which kubectl > /dev/null; then
     if [ "${CLUSTER_NAME-}" ]; then
         # The convention: the cluster name must match the name of kubectl context
         # We expect this not to be true if kubernetes cluster is still to be created (minikube/kops)
-        if ! "$KUBECTL_CMD" config use-context "${CLUSTER_NAME}"; then
+        if ! "${KUBECTL_CMD}" config use-context "${CLUSTER_NAME}"; then
             echo "Warning: failed to switch kubectl context to: ${CLUSTER_NAME}"
             echo "Does a matching Kubernetes context exist?"
         fi
 
         # Setting the default namespace for current context
-        "$KUBECTL_CMD" config set-context "$("$KUBECTL_CMD" config current-context)" "--namespace=${NAMESPACE}" &>/dev/null || true
+        "${KUBECTL_CMD}" config set-context "$("${KUBECTL_CMD}" config current-context)" "--namespace=${NAMESPACE}" &>/dev/null || true
 
         # shellcheck disable=SC2153
         echo "Current context: ${context} (kubectl context: ${CLUSTER_NAME}), namespace=${NAMESPACE}"

scripts/evergreen/build_multi_cluster_kubeconfig_creator.sh

@@ -33,7 +33,7 @@ chmod +x docker/mongodb-kubernetes-tests/multi-cluster-kube-config-creator_s390x
 chmod +x docker/mongodb-kubernetes-tests/multi-cluster-kube-config-creator_ppc64le
 chmod +x docker/mongodb-kubernetes-tests/multi-cluster-kube-config-creator_arm64
 
-cp docker/mongodb-kubernetes-tests/multi-cluster-kube-config-creator_${ARCH} docker/mongodb-kubernetes-tests/multi-cluster-kube-config-creator || true
+cp docker/mongodb-kubernetes-tests/multi-cluster-kube-config-creator_"${ARCH}" docker/mongodb-kubernetes-tests/multi-cluster-kube-config-creator || true
 
 mkdir -p bin || true
 cp docker/mongodb-kubernetes-tests/multi-cluster-kube-config-creator bin/kubectl-mongodb || true

scripts/evergreen/e2e/build_tests_image_ibm.sh

@@ -9,6 +9,6 @@ cp requirements.txt docker/mongodb-kubernetes-tests/requirements.txt
 cp -rf helm_chart docker/mongodb-kubernetes-tests/helm_chart
 
 echo "Building mongodb-kubernetes-tests image with tag: ${BASE_REPO_URL}/mongodb-kubernetes-tests:${version_id}-$(arch)"
-cd docker/mongodb-kubernetes-tests
+cd docker/mongodb-kubernetes-tests || exit
 sudo podman buildx build --progress plain . -f Dockerfile -t "${BASE_REPO_URL}/mongodb-kubernetes-tests:${version_id}-$(arch)" --build-arg PYTHON_VERSION="${PYTHON_VERSION}"
 sudo podman push --authfile="/root/.config/containers/auth.json" "${BASE_REPO_URL}/mongodb-kubernetes-tests:${version_id}-$(arch)"

scripts/evergreen/setup_aws.sh

@@ -58,8 +58,8 @@ install_aws_cli_pip() {
     ${pip_cmd} install --user awscli
 
     # Add ~/.local/bin to PATH if not already there (where pip --user installs)
-    if [[ ":$PATH:" != *":$HOME/.local/bin:"* ]]; then
-        export PATH="$HOME/.local/bin:$PATH"
+    if [[ ":${PATH}:" != *":${HOME}/.local/bin:"* ]]; then
+        export PATH="${HOME}/.local/bin:${PATH}"
         echo "Added ~/.local/bin to PATH"
     fi
 

scripts/evergreen/setup_kind.sh

@@ -12,7 +12,7 @@ arch_suffix=$(detect_architecture)
 latest_version="v0.27.0"
 
 # Only proceed with installation if architecture is supported (amd64 or arm64)
-if [[ "$arch_suffix" == "amd64" || "$arch_suffix" == "arm64" ]]; then
+if [[ "${arch_suffix}" == "amd64" || "${arch_suffix}" == "arm64" ]]; then
   mkdir -p "${PROJECT_DIR}/bin/"
   echo "Saving kind to ${PROJECT_DIR}/bin"
   curl --retry 3 --silent -L "https://github.com/kubernetes-sigs/kind/releases/download/${latest_version}/kind-${os}-${arch_suffix}" -o kind

scripts/evergreen/setup_kubectl.sh

@@ -22,7 +22,7 @@ mv kubectl "${bindir}"
 echo "Downloading helm for ${ARCH}"
 helm_archive="${tmpdir}/helm.tgz"
 helm_version="v3.17.1"
-curl -s https://get.helm.sh/helm-${helm_version}-linux-${ARCH}.tar.gz --output "${helm_archive}"
+curl -s https://get.helm.sh/helm-${helm_version}-linux-"${ARCH}".tar.gz --output "${helm_archive}"
 
 tar xfz "${helm_archive}" -C "${tmpdir}" &> /dev/null
 mv "${tmpdir}/linux-${ARCH}/helm" "${bindir}"

scripts/minikube/setup_minikube.sh

@@ -50,7 +50,7 @@ setup_local_registry_and_custom_image() {
       registry_running=true
     fi
 
-    if ! $registry_running; then
+    if ! ${registry_running}; then
       echo "Starting local container registry on port 5000..."
 
       # Clean up any existing registry first