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msherekar/README.md

Welcome to my github where AI meets Bio x Bio

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  • 🔭 I’m currently working on Virtual Cell Challenge, Enzyme Engineeting Challenge, Protein Designing Project and Integrated Analysis Environment for Wet-Lab Scientists.
  • 🌱 I’m currently learning Graph Neural Networks, Physics Based Neural Networks, Models that combine biophysical and biochemical properties of a protein, Model Context Protocol, Front End engineering to create a user interface
  • 👯 I’m looking to collaborate on Protein Designing and designing DL models for omics datasets
  • 🤔 I’m looking for help with Front End engineering to create a user interface
  • 💬 I blog at https://medium.com/@mukulsherekar
  • 📫 How to reach me: https://www.linkedin.com/in/mukulsherekar/

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  1. bulkRNASeq bulkRNASeq Public

    End-to-End Pipeline for Bulk RNA Seq Data Processing

    Python 1

  2. CART CART Public

    Enhancing CAR-T cell activity prediction via fine-tuning protein language models with generated CAR sequences

    Python 2

  3. Mammography Mammography Public

    CNN model(s) for mammography data

    Python 1

  4. AI-Systems AI-Systems Public

    Various AI Systems

    Jupyter Notebook

  5. DEGCNN DEGCNN Public

    A CNN model to predict differentially expressed genes

    Python