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* Modified the LIONESS R code to disallow PANDA inference unless either a PPI or motif are provided * add mode parameter to lioness (#336) * update maintainer * update maintainer * update maintainer * update maintainer (#337) * update maintainer * update maintainer * Update ALPACA.R * update sambar (#338) * Converted factor to character in network for plotting (#340) * Otter patch 2 (#347) * update sambar * update OTTER * Update main.yml * Update main.yml * Devel (#352) * update sambar * update maintainer * Fix monster pvalues (#346) * 1.6.2 (#339) * Modified the LIONESS R code to disallow PANDA inference unless either a PPI or motif are provided * add mode parameter to lioness (#336) * update maintainer * update maintainer * update maintainer * update maintainer (#337) * update maintainer * update maintainer * Update ALPACA.R * update sambar (#338) --------- Co-authored-by: Tara Eicher <taraeicher@yahoo.com> * Changing 'monsterCalculateTmPValues' to follow the same strategy as the plot. From '1' to '2', (rows and columns). Fixing Issue #335. * Update main.yml * Update main.yml * Update main.yml * Update README.md * Update main.yml * temporarily deactivating test * checking that non-parametric works similar to zscore pvalue in monster * fixing monster pvalue * reconciling monster pvalues * reconciling pvalues * fixing testing and adding cases * fixing testing * adding test file * adding test file * moving data * fixing test * Delete data/monsterPvals.RData * Update test-monster.R --------- Co-authored-by: Marouen <marouenbg@users.noreply.github.com> Co-authored-by: Tara Eicher <taraeicher@yahoo.com> Co-authored-by: violafanfani <viol.fanfani@gmail.com> * Delete data/testDatasetMonster.RData --------- Co-authored-by: Tara Eicher <taraeicher@yahoo.com> Co-authored-by: violafanfani <35488779+violafanfani@users.noreply.github.com> Co-authored-by: violafanfani <viol.fanfani@gmail.com>
Adding SEAHORSE
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SEAHORSE was merged into master rather than devel. Merging into devel.