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Add GA track code to latest docs
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‎assets/docs/latest/.buildinfo‎

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# Sphinx build info version 1
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# This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
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config: 052e4c2bf69462b1181ecc3cd7abea34
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config: a0f65b699793b5f604c9b2e87fef2ccb
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tags: 645f666f9bcd5a90fca523b33c5a78b7

‎assets/docs/latest/_sources/channel.rst.txt‎

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@@ -340,7 +340,7 @@ pair and the second element is the list of files (sorted in lexicographical orde
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Channel
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.fromFilePairs('/my/data/SRR*_{1,2}.fastq')
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.println()
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.view()
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It will produce an output similar to the following::
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Channel
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.fromFilePairs('/some/data/*', size: -1) { file -> file.extension }
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.println { ext, files -> "Files with the extension $ext are $files" }
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.view { ext, files -> "Files with the extension $ext are $files" }
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Table of optional parameters available:
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Channel
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.fromSRA('SRP043510')
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.println()
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.view()
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It returns::
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ids = ['ERR908507', 'ERR908506', 'ERR908505']
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Channel
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.fromSRA(ids)
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.println()
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.view()
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::
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‎assets/docs/latest/_sources/process.rst.txt‎

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}
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receiver.println { "Received: $it" }
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receiver.view { "Received: $it" }
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Valid output values are value literals, input values identifiers, variables accessible in the process scope and

‎assets/docs/latest/amazons3.html‎

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<p>
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&copy; Copyright 2013-2019, Centre for Genomic Regulation (CRG). 2020, Seqera Labs.
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&copy; Copyright 2020, Seqera Labs. 2013-2019, Centre for Genomic Regulation (CRG).
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</p>
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</div>
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<!-- Theme Analytics -->
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<script>
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(i[r].q=i[r].q||[]).push(arguments)},i[r].l=1*new Date();a=s.createElement(o),
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m=s.getElementsByTagName(o)[0];a.async=1;a.src=g;m.parentNode.insertBefore(a,m)
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})(window,document,'script','https://www.google-analytics.com/analytics.js','ga');
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ga('create', 'UA-364526-10', 'auto');
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ga('send', 'pageview');
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</script>
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</body>

‎assets/docs/latest/awscloud.html‎

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&copy; Copyright 2013-2019, Centre for Genomic Regulation (CRG). 2020, Seqera Labs.
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&copy; Copyright 2020, Seqera Labs. 2013-2019, Centre for Genomic Regulation (CRG).
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<!-- Theme Analytics -->
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<script>
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(function(i,s,o,g,r,a,m){i['GoogleAnalyticsObject']=r;i[r]=i[r]||function(){
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(i[r].q=i[r].q||[]).push(arguments)},i[r].l=1*new Date();a=s.createElement(o),
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m=s.getElementsByTagName(o)[0];a.async=1;a.src=g;m.parentNode.insertBefore(a,m)
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})(window,document,'script','https://www.google-analytics.com/analytics.js','ga');
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ga('create', 'UA-364526-10', 'auto');
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ga('send', 'pageview');
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</script>
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</body>

‎assets/docs/latest/basic.html‎

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&copy; Copyright 2013-2019, Centre for Genomic Regulation (CRG). 2020, Seqera Labs.
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&copy; Copyright 2020, Seqera Labs. 2013-2019, Centre for Genomic Regulation (CRG).
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</p>
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<!-- Theme Analytics -->
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<script>
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(function(i,s,o,g,r,a,m){i['GoogleAnalyticsObject']=r;i[r]=i[r]||function(){
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(i[r].q=i[r].q||[]).push(arguments)},i[r].l=1*new Date();a=s.createElement(o),
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m=s.getElementsByTagName(o)[0];a.async=1;a.src=g;m.parentNode.insertBefore(a,m)
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})(window,document,'script','https://www.google-analytics.com/analytics.js','ga');
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ga('create', 'UA-364526-10', 'auto');
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ga('send', 'pageview');
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‎assets/docs/latest/channel.html‎

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pair and the second element is the list of files (sorted in lexicographical order). For example:</p>
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<div class="highlight-default notranslate"><div class="highlight"><pre><span></span><span class="n">Channel</span>
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<span class="o">.</span><span class="n">fromFilePairs</span><span class="p">(</span><span class="s1">&#39;/my/data/SRR*_{1,2}.fastq&#39;</span><span class="p">)</span>
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<span class="o">.</span><span class="n">println</span><span class="p">()</span>
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<span class="o">.</span><span class="n">view</span><span class="p">()</span>
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</pre></div>
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<p>It will produce an output similar to the following:</p>
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For example:</p>
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<div class="highlight-default notranslate"><div class="highlight"><pre><span></span><span class="n">Channel</span>
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<span class="o">.</span><span class="n">fromFilePairs</span><span class="p">(</span><span class="s1">&#39;/some/data/*&#39;</span><span class="p">,</span> <span class="n">size</span><span class="p">:</span> <span class="o">-</span><span class="mi">1</span><span class="p">)</span> <span class="p">{</span> <span class="n">file</span> <span class="o">-&gt;</span> <span class="n">file</span><span class="o">.</span><span class="n">extension</span> <span class="p">}</span>
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<span class="o">.</span><span class="n">println</span> <span class="p">{</span> <span class="n">ext</span><span class="p">,</span> <span class="n">files</span> <span class="o">-&gt;</span> <span class="s2">&quot;Files with the extension $ext are $files&quot;</span> <span class="p">}</span>
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<span class="o">.</span><span class="n">view</span> <span class="p">{</span> <span class="n">ext</span><span class="p">,</span> <span class="n">files</span> <span class="o">-&gt;</span> <span class="s2">&quot;Files with the extension $ext are $files&quot;</span> <span class="p">}</span>
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<p>Table of optional parameters available:</p>
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the FASTQ files matching the specified criteria i.e project or accession number(s). For example:</p>
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<span class="o">.</span><span class="n">fromSRA</span><span class="p">(</span><span class="s1">&#39;SRP043510&#39;</span><span class="p">)</span>
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<span class="o">.</span><span class="n">println</span><span class="p">()</span>
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<span class="o">.</span><span class="n">view</span><span class="p">()</span>
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<p>It returns:</p>
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<div class="highlight-default notranslate"><div class="highlight"><pre><span></span><span class="n">ids</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;ERR908507&#39;</span><span class="p">,</span> <span class="s1">&#39;ERR908506&#39;</span><span class="p">,</span> <span class="s1">&#39;ERR908505&#39;</span><span class="p">]</span>
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<span class="o">.</span><span class="n">fromSRA</span><span class="p">(</span><span class="n">ids</span><span class="p">)</span>
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<span class="o">.</span><span class="n">view</span><span class="p">()</span>
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<div class="highlight-default notranslate"><div class="highlight"><pre><span></span><span class="p">[</span><span class="n">ERR908507</span><span class="p">,</span> <span class="p">[</span><span class="n">ftp</span><span class="p">:</span><span class="o">//</span><span class="n">ftp</span><span class="o">.</span><span class="n">sra</span><span class="o">.</span><span class="n">ebi</span><span class="o">.</span><span class="n">ac</span><span class="o">.</span><span class="n">uk</span><span class="o">/</span><span class="n">vol1</span><span class="o">/</span><span class="n">fastq</span><span class="o">/</span><span class="n">ERR908</span><span class="o">/</span><span class="n">ERR908507</span><span class="o">/</span><span class="n">ERR908507_1</span><span class="o">.</span><span class="n">fastq</span><span class="o">.</span><span class="n">gz</span><span class="p">,</span> <span class="n">ftp</span><span class="p">:</span><span class="o">//</span><span class="n">ftp</span><span class="o">.</span><span class="n">sra</span><span class="o">.</span><span class="n">ebi</span><span class="o">.</span><span class="n">ac</span><span class="o">.</span><span class="n">uk</span><span class="o">/</span><span class="n">vol1</span><span class="o">/</span><span class="n">fastq</span><span class="o">/</span><span class="n">ERR908</span><span class="o">/</span><span class="n">ERR908507</span><span class="o">/</span><span class="n">ERR908507_2</span><span class="o">.</span><span class="n">fastq</span><span class="o">.</span><span class="n">gz</span><span class="p">]]</span>
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&copy; Copyright 2013-2019, Centre for Genomic Regulation (CRG). 2020, Seqera Labs.
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&copy; Copyright 2020, Seqera Labs. 2013-2019, Centre for Genomic Regulation (CRG).
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</p>
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<!-- Theme Analytics -->
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<script>
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(function(i,s,o,g,r,a,m){i['GoogleAnalyticsObject']=r;i[r]=i[r]||function(){
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(i[r].q=i[r].q||[]).push(arguments)},i[r].l=1*new Date();a=s.createElement(o),
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m=s.getElementsByTagName(o)[0];a.async=1;a.src=g;m.parentNode.insertBefore(a,m)
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})(window,document,'script','https://www.google-analytics.com/analytics.js','ga');
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ga('create', 'UA-364526-10', 'auto');
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ga('send', 'pageview');
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</script>
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‎assets/docs/latest/conda.html‎

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<p>
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&copy; Copyright 2013-2019, Centre for Genomic Regulation (CRG). 2020, Seqera Labs.
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&copy; Copyright 2020, Seqera Labs. 2013-2019, Centre for Genomic Regulation (CRG).
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<!-- Theme Analytics -->
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<script>
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(i[r].q=i[r].q||[]).push(arguments)},i[r].l=1*new Date();a=s.createElement(o),
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m=s.getElementsByTagName(o)[0];a.async=1;a.src=g;m.parentNode.insertBefore(a,m)
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‎assets/docs/latest/config.html‎

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(i[r].q=i[r].q||[]).push(arguments)},i[r].l=1*new Date();a=s.createElement(o),
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‎assets/docs/latest/dnanexus.html‎

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