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Our GFF files are not strictly compliant currently: in presence of input sequences with duplicated seqids, the output GFF files will also have duplicated #sequence-region pragmas, which is not allowed according to the GFF3 spec, and fails validation.

Our GFF files are not strictly compliant currently: in presence of input sequences with duplicated seqids, the output GFF files will also have duplicated #sequence-region pragmas, which is not allowed according to the GFF3 spec, and fails validation.
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github-actions bot commented Dec 3, 2025

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#1710

@ivan-aksamentov ivan-aksamentov deleted the chore/ci-disable-output-gff-validation branch December 3, 2025 08:05
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