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fix-linting.yml
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Process NFCORE_CHIPSEQ:CHIPSEQ:MULTIQC terminated with an error exit status Fix linting from a comment #219: Issue comment #428 (comment) created by Kevin-Brockers
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Refactor local modules to the current nf-core standard Fix linting from a comment #218: Issue comment #492 (comment) created by Kevin-Brockers
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Change CUSTOM_GETCHROMSIZES to SAMTOOLS_FAIDX Fix linting from a comment #217: Issue comment #489 (comment) created by Kevin-Brockers
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Fix strict syntax errors Fix linting from a comment #216: Issue comment #491 (comment) created by JoseEspinosa
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Update pipelines to use topic channels Fix linting from a comment #215: Issue comment #483 (comment) created by Kevin-Brockers
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Updating nf-core modules and subworkflows, including preparation for topics Fix linting from a comment #214: Issue comment #487 (comment) created by Kevin-Brockers
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Fix linting from a comment Fix linting from a comment #213: created by srisarya
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Merge-template-3.5.1 Fix linting from a comment #212: Issue comment #481 (comment) created by JoseEspinosa
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Fix sample identifier in usage documentation Fix linting from a comment #211: Issue comment #477 (comment) created by nf-core-bot
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Update changelog with JSON schema improvements Fix linting from a comment #210: Issue comment #459 (comment) created by nvnieuwk
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Process NFCORE_CHIPSEQ:CHIPSEQ:FASTQ_ALIGN_BWA:BAM_SORT_STATS_SAMTOOLS:SAMTOOLS_SORT (SRR5627136_REP2_T1) terminated with an error exit status (1) Fix linting from a comment #209: Issue comment #431 (comment) created by user-mb
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Feat/nf tests Fix linting from a comment #208: Issue comment #350 (comment) created by sateeshperi
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Can we do chip seq analysis using nextflow without input sample? Fix linting from a comment #207: Issue comment #452 (comment) created by Nicobouch
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Update link to featureCounts in README.md (current link is dead) Fix linting from a comment #206: Issue comment #474 (comment) created by nf-core-bot
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Enable the use of CSI bam index Fix linting from a comment #205: Issue comment #454 (comment) created by JoseEspinosa
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Enable the use of CSI bam index Fix linting from a comment #204: Issue comment #454 (comment) created by a1ultima
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Important! Template update for nf-core/tools v3.3.1 Fix linting from a comment #203: Issue comment #464 (comment) created by nf-core-bot
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Implement nf-schema in pipeline Fix linting from a comment #202: Issue comment #472 (comment) created by nf-core-bot
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nextflow_schema.json: Any of --fasta or --genome Fix linting from a comment #201: Issue comment #471 (comment) created by nf-core-bot
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Use --bga when creating bigWigs Fix linting from a comment #200: Issue comment #470 (comment) created by edmundmiller
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Use --bga when creating bigWigs Fix linting from a comment #199: Issue comment #470 (comment) created by nf-core-bot
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Change bigWig creating to use --bga option Fix linting from a comment #198: Issue comment #468 (comment) created by FloWuenne
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Call peak without chip-seq input control. Fix linting from a comment #197: Issue comment #457 (comment) created by audrey2000
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Spike ins normalization Fix linting from a comment #196: Issue comment #321 (comment) created by nibhelim
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Update changelog with JSON schema improvements Fix linting from a comment #195: Issue comment #459 (comment) created by ftamiro
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