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lines changed Original file line number Diff line number Diff line change 3333 - " conda"
3434 - " docker"
3535 - " singularity"
36- test_name :
37- - " test"
38- - " skip_trimming"
39- - " skip_consensus_peaks"
40- - " bowtie2"
41- - " chromap"
42- - " star"
4336 parameters :
4437 - " "
4538 - " --skip_trimming"
9487 - name : Clean up Disk space
9588 uses : jlumbroso/free-disk-space@54081f138730dfa15788a46383842cd2f914a1be # v1.3.1
9689
97- - name : " Run pipeline with test data ${{ matrix.NXF_VER }} | ${{ matrix.test_name }} | ${{ matrix.profile }}"
90+ - name : " Run pipeline with test data ${{ matrix.NXF_VER }} | ${{ matrix.parameters }} | ${{ matrix.profile }}"
9891 continue-on-error : ${{ matrix.NXF_VER == 'latest-everything' }}
9992 run : |
10093 nextflow run ${GITHUB_WORKSPACE} -profile test,${{ matrix.profile }} --outdir ./results ${{ matrix.parameters }}
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