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Remove commented line
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workflows/differentialabundance.nf

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@@ -826,7 +826,6 @@ workflow DIFFERENTIALABUNDANCE {
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.join(ch_all_matrices) // [meta, samplesheet, features, [matrices]]
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.join(ch_contrasts_sorted) // [meta, contrast file]
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.join(ch_differential_grouped) // [meta, [differential results and models]]
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//.join(ch_differential_annotated_grouped) // [meta, [annotated differential results]]
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.join(ch_functional_grouped, remainder: true) // [meta, [functional results]]
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.map { [it[0], it.tail().flatten().grep()] } // [meta, [files]] // note that grep() would remove null files from join with remainder true
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.map { meta, files -> [meta, files[0], files.tail()] } // [meta, report_file, [files]]

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