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Use prefix in ENSEMBLVEP_VEP output channel globs#9931

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awgymer wants to merge 2 commits intonf-core:masterfrom
awgymer:update-vep-output-path
Open

Use prefix in ENSEMBLVEP_VEP output channel globs#9931
awgymer wants to merge 2 commits intonf-core:masterfrom
awgymer:update-vep-output-path

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@awgymer awgymer commented Feb 9, 2026

Per the warning in the docs input files may be copied back to workDir if they match an output channel glob even if they are task inputs and not in the actual output channel.

This can increase copy times and disk usage so it's better to be specific and use the prefix in the output glob where possible.

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Closes #XXX

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@awgymer awgymer requested a review from maxulysse as a code owner February 9, 2026 00:14
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