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nf-core/pairgenomealign v2.1.0 – Goya champuru

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@charles-plessy charles-plessy released this 16 May 07:13
· 118 commits to master since this release
2.1.0
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v2.1.0 "Goya champuru" - [May 16th 2025]

Added

  • New --dotplot_filter paramater to produce extra alignment plots where small off-diagonal signal is filtered out (#35).
  • New --dotplot_width, --dotplot_height and --dotplot_font_size parameters to control alignment plot size (#38).

Fixed

  • In alignment plots, contig names are now written with a nice scalable font instead of being pixellised (#44).
  • Conforms to nf-core template version 3.2.1 (#54).
  • Removed some old linting exceptions.
  • Removed the gfastats modules, which was actually not used.
  • Make sure the subworkflows collect all module versions.
  • Fix plot IDs for comptatibility with MultiQC 1.28.

Parameters

Old parameter New parameter
--dotplot_filter
--dotplot_font_size
--dotplot_height
--dotplot_width

Dependencies

Dependency Old version New version
LAST 1608 1611
MultiQC 1.27 1.28
Assets 2
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