Apply suggestions from code review

maxulysse · web-flow · commit 452850a8790c · 2024-10-09T18:23:41.000+02:00
diff --git a/subworkflows/local/utils_nfcore_rnaseq_pipeline/main.nf b/subworkflows/local/utils_nfcore_rnaseq_pipeline/main.nf
@@ -628,8 +628,8 @@ def getInferexperimentStrandedness(inferexperiment_file, stranded_threshold = 0.
         if (pe_antisense_matcher) reverseFragments = pe_antisense_matcher[0][1].toFloat() * 100
     }
 
-    return calculateStrandedness(forwardFragments, reverseFragments, unstrandedFragments, stranded_threshold, unstranded_threshold)
     // Use shared calculation function to determine strandedness
+    return calculateStrandedness(forwardFragments, reverseFragments, unstrandedFragments, stranded_threshold, unstranded_threshold)
 }
 
 //

Original file line number	Diff line number	Diff line change
`@@ -628,8 +628,8 @@ def getInferexperimentStrandedness(inferexperiment_file, stranded_threshold = 0.`
`628`	`628`	`if (pe_antisense_matcher) reverseFragments = pe_antisense_matcher[0][1].toFloat() * 100`
`629`	`629`	`}`
`630`	`630`
`631`		`- return calculateStrandedness(forwardFragments, reverseFragments, unstrandedFragments, stranded_threshold, unstranded_threshold)`
`632`	`631`	`// Use shared calculation function to determine strandedness`
	`632`	`+ return calculateStrandedness(forwardFragments, reverseFragments, unstrandedFragments, stranded_threshold, unstranded_threshold)`
`633`	`633`	`}`
`634`	`634`
`635`	`635`	`//`