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lines changed Original file line number Diff line number Diff line change @@ -39,8 +39,8 @@ process STAR_ALIGN {
3939 def prefix = task. ext. prefix ?: " ${ meta.id} "
4040
4141 // Note: 2.7X indices incompatible with AWS iGenomes so use older STAR version
42- conda_str = " bioconda::star=2.7.9a bioconda::samtools=1.13 conda-forge::gawk=5.1.0"
43- container_id = ' mulled-v2-1fa26d1ce03c295fe2fdcf85831a92fbcbd7e8c2:a7908dfb0485a80ca94e4d17b0ac991532e4e989 -0'
42+ conda_str = " bioconda::star=2.7.10a bioconda::samtools=1.15.1 conda-forge::gawk=5.1.0"
43+ container_id = ' mulled-v2-1fa26d1ce03c295fe2fdcf85831a92fbcbd7e8c2:afaaa4c6f5b308b4b6aa2dd8e99e1466b2a6b0cd -0'
4444 if (is_aws_igenome) {
4545 conda_str = " bioconda::star=2.6.1d bioconda::samtools=1.10 conda-forge::gawk=5.1.0"
4646 container_id = ' mulled-v2-1fa26d1ce03c295fe2fdcf85831a92fbcbd7e8c2:59cdd445419f14abac76b31dd0d71217994cbcc9-0'
Original file line number Diff line number Diff line change @@ -24,8 +24,8 @@ process STAR_GENOMEGENERATE {
2424 def args_list = args. tokenize()
2525
2626 // Note: 2.7X indices incompatible with AWS iGenomes so use older STAR version
27- conda_str = " bioconda::star=2.7.9a bioconda::samtools=1.13 conda-forge::gawk=5.1.0"
28- container_id = ' mulled-v2-1fa26d1ce03c295fe2fdcf85831a92fbcbd7e8c2:a7908dfb0485a80ca94e4d17b0ac991532e4e989 -0'
27+ conda_str = " bioconda::star=2.7.10a bioconda::samtools=1.15.1 conda-forge::gawk=5.1.0"
28+ container_id = ' mulled-v2-1fa26d1ce03c295fe2fdcf85831a92fbcbd7e8c2:afaaa4c6f5b308b4b6aa2dd8e99e1466b2a6b0cd -0'
2929 if (is_aws_igenome) {
3030 conda_str = " bioconda::star=2.6.1d bioconda::samtools=1.10 conda-forge::gawk=5.1.0"
3131 container_id = ' mulled-v2-1fa26d1ce03c295fe2fdcf85831a92fbcbd7e8c2:59cdd445419f14abac76b31dd0d71217994cbcc9-0'
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