update test adjacent files

maxulysse · maxulysse · commit 99eeff0bace7 · 2024-10-09T18:39:27.000+02:00
diff --git a/nf-test.config b/nf-test.config
@@ -12,7 +12,7 @@ config {
 
     // load the necessary plugins
     plugins {
-        load "nft-bam@0.3.0"
+        load "nft-bam@0.4.0"
         load "nft-utils@0.0.2"
     }
 }
diff --git a/tests/nextflow.config b/tests/nextflow.config
@@ -14,8 +14,6 @@ params {
     // for hisat2
     hisat2_build_memory = '3.GB'
 
-    validationSchemaIgnoreParams = 'genomes,igenomes_base,modules_testdata_base_path,pipelines_testdata_base_path'
-
     // TODO: check if we rather do this or disable publishdir for all processes when testing modules/subworkflows
     outdir = 'results'
 }
@@ -31,7 +29,7 @@ process {
 
 // Impose same minimum Nextflow version as the pipeline for testing
 manifest {
-    nextflowVersion = '!>=23.04.0'
+    nextflowVersion = '!>=24.04.2'
 }
 
 // Disable all Nextflow reporting options

Original file line number	Diff line number	Diff line change
`@@ -14,8 +14,6 @@ params {`
`14`	`14`	`// for hisat2`
`15`	`15`	`hisat2_build_memory = '3.GB'`
`16`	`16`
`17`		`- validationSchemaIgnoreParams = 'genomes,igenomes_base,modules_testdata_base_path,pipelines_testdata_base_path'`
`18`		`-`
`19`	`17`	`// TODO: check if we rather do this or disable publishdir for all processes when testing modules/subworkflows`
`20`	`18`	`outdir = 'results'`
`21`	`19`	`}`
`@@ -31,7 +29,7 @@ process {`
`31`	`29`
`32`	`30`	`// Impose same minimum Nextflow version as the pipeline for testing`
`33`	`31`	`manifest {`
`34`		`- nextflowVersion = '!>=23.04.0'`
	`32`	`+ nextflowVersion = '!>=24.04.2'`
`35`	`33`	`}`
`36`	`34`
`37`	`35`	`// Disable all Nextflow reporting options`